Factsheet for Solyc08g077600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g061420.1.1	Tomato	cytosol	17.3	76.4
Solyc08g061350.1.1	Tomato	mitochondrion	11.96	66.2
Solyc08g062060.1.1	Tomato	nucleus	15.52	57.55
Solyc03g061640.1.1	Tomato	cytosol	23.16	54.82
Solyc08g061370.1.1	Tomato	cytosol	23.92	54.02
Solyc08g077590.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	22.65	51.15
Solyc08g061340.1.1	Tomato	cytosol	29.01	51.12
Solyc08g062080.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	15.27	50.42
Solyc08g062070.1.1	Tomato	cytosol	15.78	46.62
Solyc08g077670.1.1	Tomato	cytosol	49.87	43.27
Solyc01g049740.1.1	Tomato	endoplasmic reticulum, extracellular	22.14	36.1
PGSC0003DMT400004629	Potato	nucleus	80.41	35.43
Solyc08g062000.1.1	Tomato	cytosol	33.33	33.5
Solyc08g061390.1.1	Tomato	cytosol	21.12	33.47
Solyc04g054440.1.1	Tomato	nucleus	54.71	32.82
Solyc08g061990.1.1	Tomato	mitochondrion	31.81	32.47
Solyc01g068320.1.1	Tomato	cytosol	52.42	30.84
Solyc08g077610.1.1	Tomato	nucleus	51.91	30.49
Solyc02g033050.1.1	Tomato	nucleus	46.06	28.78
Solyc01g068300.1.1	Tomato	cytosol	28.24	28.46
Solyc01g060460.1.1	Tomato	nucleus	54.2	27.99
Solyc08g077690.2.1	Tomato	nucleus	50.38	26.72
Solyc08g061410.1.1	Tomato	cytosol	27.99	25.06
VIT_02s0012g00110.t01	Wine grape	cytosol	36.39	22.17
Os05t0392400-01	Rice	cytosol, nucleus	19.85	17.33
Zm00001d047708_P001	Maize	cytosol	6.87	15.7
KRH39939	Soybean	nucleus	24.43	15.56
Os02t0650800-00	Rice	cytosol	32.06	13.45
TraesCS3A01G220700.1	Wheat	nucleus	33.08	12.31
GSMUA_Achr7P06840_001	Banana	nucleus	29.52	12.3
TraesCS3B01G251000.1	Wheat	nucleus	32.82	12.16
TraesCS3A01G238800.1	Wheat	nucleus	32.57	12.11
Solyc04g056400.2.1	Tomato	cytosol, nucleus, plastid	11.2	11.92
KRH23851	Soybean	mitochondrion, nucleus	34.86	11.75
AT3G24340.1	Thale cress	nucleus	33.84	11.75
KRH46527	Soybean	nucleus	33.08	11.32
KXG31163	Sorghum	nucleus	35.37	10.88
TraesCS6A01G241100.1	Wheat	nucleus	31.3	10.8
TraesCS3D01G231800.1	Wheat	nucleus	34.86	10.79
KRH46528	Soybean	cytosol, extracellular, nucleus	31.55	9.95
TraesCS2D01G053900.1	Wheat	nucleus	27.48	9.94
TraesCS1B01G256700.1	Wheat	mitochondrion, nucleus	36.64	9.65
TraesCS1D01G245400.1	Wheat	nucleus	36.39	9.63
TraesCS1A01G245700.1	Wheat	mitochondrion, nucleus	36.39	9.6
OQU77943	Sorghum	mitochondrion	34.86	9.4
Solyc01g109970.2.1	Tomato	extracellular	21.37	9.26
AT1G05490.1	Thale cress	mitochondrion, nucleus	32.82	9.15
Solyc06g050510.2.1	Tomato	nucleus	27.74	8.47
Solyc07g053870.2.1	Tomato	plastid	13.74	6.09
Solyc04g050150.2.1	Tomato	nucleus	18.32	5.92
Solyc01g068280.2.1	Tomato	nucleus	17.05	5.51
Solyc09g066480.2.1	Tomato	nucleus	16.54	5.36
Solyc08g074500.2.1	Tomato	cytosol, nucleus, plastid	13.74	4.26
Solyc04g056410.2.1	Tomato	nucleus	3.82	2.56
Solyc04g050160.2.1	Tomato	nucleus	2.04	2.54
Solyc08g077580.1.1	Tomato	cytosol	0.51	1.16
Solyc08g074520.1.1	Tomato	nucleus	1.02	0.61
Solyc08g077650.1.1	Tomato	cytosol	0.0	0.0
Os02t0161300-01	Rice	extracellular	0.0	0.0
Os02t0762600-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc08g077600.1.1	EnsemblPlantsGene:Solyc08g077600.1	Gene3D:3.40.50.10810	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:IPR014001	InterPro:IPR038718	InterPro:P-loop_NTPase	InterPro:SNF2-like_sf
InterPro:SNF2_N	PANTHER:PTHR10799	PANTHER:PTHR10799:SF858	PFAM:PF00176	PFscan:PS51192	SUPFAM:SSF52540
UniParc:UPI000276C4AA	UniProt:K4CNB9	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr8:-:61556356..61558326

Molecular Weight (calculated)

44597.2 Da

IEP (calculated)

10.171

GRAVY (calculated)

-0.413

Length

393 amino acids

Sequence
(BLAST)

001: MDSGDGSASR WFCRKCKRPI TKTRYTSCEC GCKTWVNDGT NEKWLIVDIS LASPSLNNKG PNLRSDDRES EQDCEVAGRK RSMMNPAETE NQNKGRTYFL
101: RPRTVWDLVS PNVKAAMYPH QRGGFEFMWK HIAGAITFER LREPLSKSRG GCIISHPPGT ERIRLTIVFL QSLLKMYPKS QPIIIAPSRR KDTQFIHLVK
201: LKSWAESNSV LGISYDLFRK LMLEDGEVNA KVIQKMLLKS PGLLVLEEGH TARNENSRVW KALKKVEIEK RILLSGTPFQ NNIKEFYNTL SIVCPKFVED
301: SEQKWASLSS SIDNNPRALE KLRDIIAAIV HTCSEDVKKV SIPGLKSTVI HLKPTDLQKE LLKKIPGHPG FLSNLLSLIS IHPSLVANRK EFL

Best Arabidopsis Sequence Match ( AT1G05490.1 )
(BLAST)

0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP

Arabidopsis Description

CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.