Factsheet for Os02t0161300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0636700-01	Rice	cytoskeleton, cytosol, nucleus	2.54	2.77
Os02t0161200-01	Rice	nucleus	1.96	2.35
Os10t0457700-01	Rice	nucleus	4.89	1.9
Os02t0650800-00	Rice	cytosol	2.94	1.6
Os07t0692500-01	Rice	cytosol	1.76	1.58
Os04t0692750-01	Rice	cytosol	2.54	1.32
Os08t0289400-00	Rice	cytosol, nucleus	1.17	1.14
PGSC0003DMT400004672	Potato	nucleus	1.76	0.9
PGSC0003DMT400038789	Potato	nucleus	1.96	0.9
Solyc08g077670.1.1	Tomato	cytosol	0.78	0.88
Os05t0247900-01	Rice	plastid	1.37	0.82
PGSC0003DMT400017313	Potato	nucleus	1.76	0.75
Os02t0762800-00	Rice	nucleus	1.37	0.71
PGSC0003DMT400004629	Potato	nucleus	1.17	0.67
Os06t0255700-01	Rice	cytosol	1.17	0.63
PGSC0003DMT400037430	Potato	nucleus	0.78	0.6
Os03t0165266-00	Rice	nucleus	1.17	0.56
Os01t0102800-01	Rice	cytosol, nucleus, plastid	0.98	0.55
PGSC0003DMT400088837	Potato	cytosol	0.2	0.53
PGSC0003DMT400004673	Potato	nucleus	0.78	0.44
PGSC0003DMT400085944	Potato	cytosol	0.2	0.43
Solyc01g049740.1.1	Tomato	endoplasmic reticulum, extracellular	0.2	0.41
Os07t0692401-00	Rice	mitochondrion	0.39	0.41
Solyc08g077690.2.1	Tomato	nucleus	0.59	0.4
Solyc08g061390.1.1	Tomato	cytosol	0.2	0.4
Solyc01g060460.1.1	Tomato	nucleus	0.59	0.39
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	0.2	0.15
Solyc08g061370.1.1	Tomato	cytosol	0.0	0.0
Solyc04g054440.1.1	Tomato	nucleus	0.0	0.0
Solyc08g061410.1.1	Tomato	cytosol	0.0	0.0
Solyc08g061990.1.1	Tomato	mitochondrion	0.0	0.0
Solyc08g062000.1.1	Tomato	cytosol	0.0	0.0
Solyc08g062060.1.1	Tomato	nucleus	0.0	0.0
Solyc08g062070.1.1	Tomato	cytosol	0.0	0.0
Solyc08g077580.1.1	Tomato	cytosol	0.0	0.0
Solyc08g077590.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	0.0	0.0
Solyc08g077600.1.1	Tomato	cytosol	0.0	0.0
Solyc08g077610.1.1	Tomato	nucleus	0.0	0.0
Solyc08g077650.1.1	Tomato	cytosol	0.0	0.0
Os02t0762600-01	Rice	cytosol	0.0	0.0
Solyc08g061350.1.1	Tomato	mitochondrion	0.0	0.0
Solyc08g061340.1.1	Tomato	cytosol	0.0	0.0
Os08t0243866-00	Rice	endoplasmic reticulum	0.0	0.0
Solyc03g061640.1.1	Tomato	cytosol	0.0	0.0
Solyc02g033050.1.1	Tomato	nucleus	0.0	0.0
Solyc01g068320.1.1	Tomato	cytosol	0.0	0.0
Solyc01g068300.1.1	Tomato	cytosol	0.0	0.0
PGSC0003DMT400096321	Potato	nucleus	0.0	0.0
PGSC0003DMT400090992	Potato	mitochondrion	0.0	0.0
Os04t0692700-01	Rice	nucleus	0.0	0.0
PGSC0003DMT400085993	Potato	cytosol	0.0	0.0
Os05t0392400-01	Rice	cytosol, nucleus	0.0	0.0
PGSC0003DMT400033315	Potato	nucleus	0.0	0.0
Os07t0692600-01	Rice	mitochondrion	0.0	0.0
PGSC0003DMT400017302	Potato	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Os02t0161300-01	EnsemblPlantsGene:Os02g0161300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:ARM-type_fold	InterPro:DUF3535	ncoils:Coil	PANTHER:PTHR36498	PFAM:PF12054	ProteinID:BAF07891.1
ProteinID:BAS77113.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0000DF0581	UniProt:Q0E3P7	MapMan:12.4.1.4.2
MapMan:15.3.5.7.2	:	:	:	:	:

Description

Similar to Mot1 (Fragment). (Os02t0161300-01)

Coordinates

chr2:+:3311245..3313190

Molecular Weight (calculated)

55771.9 Da

IEP (calculated)

6.773

GRAVY (calculated)

-0.091

Length

511 amino acids

Sequence
(BLAST)

001: VGNTRNSAKL WLASILGDAL QVVFQNLLLE SNDEIIRSSE RAWKLLLQCP TEDLESAASS YFSNWVQLAT TPYGTALDSA KMFLPVALPR GSRSRAAAKI
101: KSARLEHENT RMISFGSTGE NTSQEKHSEA SLSVSKIIVG SDSDKSVTHT RVLTSMALGL FASKLPEGSW QVVLGPLASD LMSLSGVQRQ VASMVIVSWF
201: KDLRKSDPAA VGTLLAFLSS LKGWMLDLLA CSDPSFPTKD SPLPYAELAR TYRKMRNEAN NLFQSIESCA LLKEYTSNLN FEADMLSVDD AINFTSKLLL
301: PSEPDFSLDS DKIVLNNIES AKQGLLSTSG YLKCVQNNLH VTVSSLVASA VVWMAGLPSK LNPVILPLMA AVKREQEEIL QDKAADALAE LIFSCVGRKP
401: GPNDKLTKNL CTLTCTDASE TPQAAVINSI QVIEDQNLLS IGKRFSNHKS RGQMTSGGES KSEGFISRRG SELAFKHLCE KFGASLFEKL PKLWDCLTEF
501: LKPVKTGDDL M

Best Arabidopsis Sequence Match ( AT3G54280.1 )
(BLAST)

0001: MAQQQSSRLN RLLTLLDTGS TQATRLTAAK QIGDIAKSHP QDLSSLLRKV LHHLRSKKWD TRVAAAHAIG AIVLNVKHPS LSELLNSLAT KLGEAGISDN
0101: VDEVVAFRNL QSKILANAPF RSFEMNKVLE FGALLASGGQ EYDILNDNSK NPRDRVARQK KNLRRRLGLD MCEQFMDVNE MIRDEDLIEQ KSNVPANGVG
0201: NRLYANCSPH HIQQFVSRMV PRVNSRRPSA RELNLLKRKA KISSKDQAKG SCEVADVEMS SSHVASTSKR ILSDSLDSSK ADIGNEDDIE PDGDGKWPFH
0301: SFVEQLILDM FDPAWEIRHG SVMALREILM LHGGSAGVST EEFSSDNGFE LKDVLNKVTR EREIDLNMQV SENELEPLRK RPKIEDPSKS FIDNTVLEVI
0401: GGDYDINVKD EDAEFLLPPV KVNGQTDCSS TKLEPQSSMD DSTSHSEINH VAEVNNHFED KSFIEEPVIP KQQEENLEVL DLVKQARHSW IKNFEFLQDC
0501: TIRFLCVLSL DRFGDYISDQ VVAPVREACA QALGATFKYM NPSLIYETLN ILLQMQRRPE WEIRHGSLLG IKYLVAVRQE MLQDLLGYIL PACKAGLEDS
0601: DDDVRAVAAD ALIPAAAAIV SLRGQTLLSI VMLLWDILLE LDDLSPSTSS IMNLLAEIYS QDDMTLVMHE ELSLGEEQNI ELNEMGHIES IGERRDVKES
0701: PYALSGLAPR LWPFTRHDIT SVRFSAIRTL ERLLEAGCRK NISGQSKSSF WPSSILGDTL RIVFQNLLLE STEEILECSE RVWRLLVQCP VDDLEDTAKF
0801: YMASWIELAA TPYGSTLDAT KMFWPVAPPR KSHFKAAAKM KAVKLENEAS SILGFDYARS SASLEKQEDA SARSTKIIVG SDMEMSVTRT RVVTASALGI
0901: FASRLREGSM QFVVDPLSST LTSMSGVQRQ VGSIVLISWF RETKCKAPSD GSGSLPGFPS PLKKWLLDLL ACADPAFPTK DIFLPYAELS RTYTKMRNEA
1001: SQLLHTVETC HCFDKLLSTN KLNVESVTAD ETIDFASTLD LWNKESAGNE SLEKQVFEDV ESSRQQLLST AGYLKCVQSN LHITVTSLVA AAVVWMSEFP
1101: ARLNPIILPL MASIKREQEQ ILQQIAAEAL AELIAYCVDR KPSPNDKLIK NICSLTCMDP SETPQASIIS SMDIVDDMDF LSSRSNTGKQ KAKVVLASGE
1201: DRSKVEGFIT RRGSELALKH LSLKFGGSLF DKLPKLWECL TEVLVPEIPS DQQKIDLKIE SISDPQVLIN NIQVVRSIAP VMEETLKPRL LSLLPCIFKC
1301: VRHSHVAVRL AASRCVMTMA KSMTTDVMAA VVESAIPMLG DLTCISGRQG AGMLIGLLVQ GLGVELVPYS PLLVVPLLRC MSDVDSSVRQ SVTRSFAALV
1401: PMLPLARGVP PPVGLSKDLS SNAEDAKFLE QLLDNSHIDD YKLCTELKVQ LRRYQQEGIN WLGFLKRFKL HGILCDDMGL GKTLQASAIV ASDAAERRGS
1501: TDELDVFPSI IVCPSTLVGH WAFEIEKYID LSLLSVLQYV GSAQDRVSLR EQFNNHNVII TSYDVVRKDV DYLTQFSWNY CILDEGHIIK NAKSKITAAV
1601: KQLKAQHRLI LSGTPIQNNI MELWSLFDFL MPGFLGTERQ FQASYGKPLL AARDPKCSAK DAEAGVLAME ALHKQVMPFL LRRTKEEVLS DLPEKIIQDR
1701: YCDLSPVQLK LYEQFSGSSA KQEISSIIKV DGSADSGNAD VAPTKASTHV FQALQYLLKL CSHPLLVLGD KVTEPVASDL AAMINGCSDI ITELHKVQHS
1801: PKLVALQEIL EECGIGSDAS SSDGTLSVGQ HRVLIFAQHK ALLDIIEKDL FQAHMKSVTY MRLDGSVVPE KRFEIVKAFN SDPTIDVLLL TTHVGGLGLN
1901: LTSADTLVFM EHDWNPMRDH QAMDRAHRLG QKRVVNVHRL IMRGTLEEKV MSLQKFKVSV ANTVINAENA SMKTMNTDQL LDLFASAETS KKGGGSSKKG
2001: SEDNDQIAGT GKGMKAILGN LEELWDQSQY TEEYNLSQFL TKLNG

Arabidopsis Description

RGD3ROOT GROWTH DEFECTIVE 3 [Source:UniProtKB/TrEMBL;Acc:F4JCU6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.