Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31163 | Sorghum | nucleus | 76.07 | 79.58 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 17.05 | 64.59 |
| Os02t0650800-00 | Rice | cytosol | 40.54 | 57.84 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 39.72 | 50.28 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 39.79 | 50.14 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 39.49 | 49.95 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 12.27 | 46.2 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 36.28 | 44.66 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 42.48 | 44.65 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 38.0 | 44.6 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 41.66 | 43.86 |
| VIT_02s0012g00110.t01 | Wine grape | cytosol | 21.02 | 43.57 |
| CDX77430 | Canola | nucleus | 21.54 | 42.79 |
| CDY59589 | Canola | nucleus | 5.53 | 42.05 |
| CDY29038 | Canola | nucleus | 5.53 | 42.05 |
| KRH39939 | Soybean | nucleus | 17.65 | 38.25 |
| CDX93009 | Canola | nucleus | 23.64 | 32.58 |
| CDY66441 | Canola | nucleus | 24.83 | 32.14 |
| CDX94823 | Canola | nucleus | 23.11 | 31.72 |
| Bra015035.1-P | Field mustard | nucleus | 24.68 | 31.67 |
| Bra001944.1-P | Field mustard | nucleus | 24.23 | 30.39 |
| AT3G24340.1 | Thale cress | nucleus | 24.61 | 29.06 |
| KRH23851 | Soybean | mitochondrion, nucleus | 25.06 | 28.73 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 29.84 | 27.8 |
| KRH46527 | Soybean | nucleus | 23.78 | 27.7 |
| Zm00001d047708_P001 | Maize | cytosol | 3.52 | 27.33 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 24.53 | 26.32 |
| CDY47279 | Canola | nucleus | 25.36 | 25.36 |
| CDY10115 | Canola | nucleus | 25.65 | 24.87 |
| Zm00001d024677_P003 | Maize | cytosol | 17.2 | 24.21 |
| AT1G05490.1 | Thale cress | mitochondrion, nucleus | 25.5 | 24.18 |
| Zm00001d049605_P037 | Maize | cytosol | 17.35 | 23.75 |
| Bra015430.1-P | Field mustard | nucleus | 26.63 | 22.49 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 18.32 | 18.37 |
| Zm00001d013828_P002 | Maize | plastid | 8.68 | 13.2 |
| Zm00001d018151_P003 | Maize | nucleus | 9.42 | 13.02 |
| Zm00001d002950_P002 | Maize | nucleus | 10.1 | 12.45 |
| Zm00001d032801_P005 | Maize | nucleus | 13.01 | 11.73 |
| Zm00001d040203_P003 | Maize | cytosol | 10.85 | 11.54 |
| Zm00001d039160_P031 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 10.77 | 7.05 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.37 | 4.63 |
Protein Annotations
| MapMan:16.10.1.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6Q6A0 | ProteinID:AQK54038.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF858 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI00084558CC | EnsemblPlantsGene:Zm00001d051324 | EnsemblPlants:Zm00001d051324_P001 | EnsemblPlants:Zm00001d051324_T001 |
| SEG:seg | : | : | : | : | : |
Description
SNF2 domain-containing protein CLASSY 4
Coordinates
chr4:+:154315290..154320142
Molecular Weight (calculated)
148904.0 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.670
Length
1337 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTRVIILLDS DKEDDGTGRQ AGRELGGAAI ASAGEASKLV KPEVVDDVGS NPVRPGALPT SLRVQGHRAP SSPSPVPAAV RKQPEIIAIS DEDNDGSRFR
0101: RVRRVKDEAS DWVLSAKAKR AMVSGVPPGS SDVKRKRKRG SSGAGDFHAL DRNLSASGAG RRTSWMAEDA GSSRNVSSSE LSRGGVGDRS GSTKKARGAP
0201: GKTRRGGGTR RERSTSAAPA NLVGGSATVG SRIRLRSRQQ GRVQCATYSA RVSSEDTGED EKHMQEQTRV EDVEFMEVDD DYDDVNVAGN VIDQESEQDE
0301: ALEGRSSQDS HGYSEDKEGK DSAALSDNEE DVGGKELLEE EEEGADQEES HIIYDGEGEQ EEDASEEETQ ELDETGEAQP FNPSNTMAGS TMRSGGDGKQ
0401: VFRRRVFEGI YLPENPHRTV GKGIQGRTRS QRKCKDKKLL KRGTFSKPYN IDIPDSTSDS EEEIEPPAPQ QGLLSSSEED NMTFGKRKRR RAAINKRWDK
0501: RLSASSDEED YGASAMDAKE RPFRRLKKGL SNLQAAKEGC RNYEGSNPGH ARYSGPNGGN LENMSSAQDD ISFKRNVHMI RIKKRGRAAK AVYDELLDSL
0601: FSGWENHIGN PVHAEAGNSL PLVFSFGDED AEENTENDKY QEQEDLWMEC GIAFQSMNIG SNGCEEDGKE IPPVKVTSCN IGQHEFIIDE QIGVRCKHCH
0701: VVDLEIRDVL PTLGKCSAER GSAINPEFDR MLKEMLNVFE QNDVLVSNGH ELPCNFGDHK AGSVWNLIPG VKETMFPHQQ DAFEFMWTKL AGGTTIEQLK
0801: HTIKSDAGGG CVISHAPGTG KTRLAITFVQ SYLEVFPHCS PVIIAPRGML ATWEKEFRKW KVKLPFHVLN STEINWSEDK TLQEQAAKNG TFHRRLLTDK
0901: MDQNYRRLVK LGSWMNGTSI IGLSYSLFRK LANHEGMDGD KVRKLLLEKP NLLVLDEGHT PRNKKSLIWK VLKRVHTEKR IILSGTLFQN NFEELYNTLR
1001: LVRPKDADAL HLETDESKDF WSSLRLNDIT KANINEVRKK LDPIVHIHSG RFLQKSLPGL RESVVILNPL LYQKEVIASM EKTVAMGLDA EYKISLASIH
1101: PSLLASAKLS MKEESILDKP KLESLRSNPS GGVKTRFVLE IVRLCEALNE RVLVFSQYLE PLSLIMEQLK ERFSWAEGEE ILLMSGKVLV KKRQTMMEVF
1201: NNMKSKAKVM LASTKACCEG ITLVGASRVV LLDVVWNPSV GRQAIGRAYR IGQRKIVYTY NLIAEGTTEK RKYDRQAKKE HMSKLLFSNE LERGGCNLPP
1301: ELTFNDRVLE ELTAREDLKN LFVKIYVDNQ TDGSRGK
0101: RVRRVKDEAS DWVLSAKAKR AMVSGVPPGS SDVKRKRKRG SSGAGDFHAL DRNLSASGAG RRTSWMAEDA GSSRNVSSSE LSRGGVGDRS GSTKKARGAP
0201: GKTRRGGGTR RERSTSAAPA NLVGGSATVG SRIRLRSRQQ GRVQCATYSA RVSSEDTGED EKHMQEQTRV EDVEFMEVDD DYDDVNVAGN VIDQESEQDE
0301: ALEGRSSQDS HGYSEDKEGK DSAALSDNEE DVGGKELLEE EEEGADQEES HIIYDGEGEQ EEDASEEETQ ELDETGEAQP FNPSNTMAGS TMRSGGDGKQ
0401: VFRRRVFEGI YLPENPHRTV GKGIQGRTRS QRKCKDKKLL KRGTFSKPYN IDIPDSTSDS EEEIEPPAPQ QGLLSSSEED NMTFGKRKRR RAAINKRWDK
0501: RLSASSDEED YGASAMDAKE RPFRRLKKGL SNLQAAKEGC RNYEGSNPGH ARYSGPNGGN LENMSSAQDD ISFKRNVHMI RIKKRGRAAK AVYDELLDSL
0601: FSGWENHIGN PVHAEAGNSL PLVFSFGDED AEENTENDKY QEQEDLWMEC GIAFQSMNIG SNGCEEDGKE IPPVKVTSCN IGQHEFIIDE QIGVRCKHCH
0701: VVDLEIRDVL PTLGKCSAER GSAINPEFDR MLKEMLNVFE QNDVLVSNGH ELPCNFGDHK AGSVWNLIPG VKETMFPHQQ DAFEFMWTKL AGGTTIEQLK
0801: HTIKSDAGGG CVISHAPGTG KTRLAITFVQ SYLEVFPHCS PVIIAPRGML ATWEKEFRKW KVKLPFHVLN STEINWSEDK TLQEQAAKNG TFHRRLLTDK
0901: MDQNYRRLVK LGSWMNGTSI IGLSYSLFRK LANHEGMDGD KVRKLLLEKP NLLVLDEGHT PRNKKSLIWK VLKRVHTEKR IILSGTLFQN NFEELYNTLR
1001: LVRPKDADAL HLETDESKDF WSSLRLNDIT KANINEVRKK LDPIVHIHSG RFLQKSLPGL RESVVILNPL LYQKEVIASM EKTVAMGLDA EYKISLASIH
1101: PSLLASAKLS MKEESILDKP KLESLRSNPS GGVKTRFVLE IVRLCEALNE RVLVFSQYLE PLSLIMEQLK ERFSWAEGEE ILLMSGKVLV KKRQTMMEVF
1201: NNMKSKAKVM LASTKACCEG ITLVGASRVV LLDVVWNPSV GRQAIGRAYR IGQRKIVYTY NLIAEGTTEK RKYDRQAKKE HMSKLLFSNE LERGGCNLPP
1301: ELTFNDRVLE ELTAREDLKN LFVKIYVDNQ TDGSRGK
0001: MECIGKRVKS RSWQRLQAVN KRKKMETVAP VTSPPKKRRQ KKPKNYDSDI EDITPTCNDS VPPPQVSNMY SVPNNSVKES FSRIMRDLNV EKKSGPSSSR
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
0101: LTDGSEQNPC LKERSFRVSD LGVEKKCSPE ITDLDVGIPV PRFSKLKDVS EQKNTCLMQK SSPEIADLDL VISVPSSSVL KDVSEEIRFL KDKCSPEIRG
0201: LVLEKSVPGE IEILSDSESE TEARRRASAK KKLFEESSRI VESISDGEDS SSETDEEEEE NQDSEDNNTK DNVTVESLSS EDPSSSSSSS SSSSSSSSSS
0301: SSDDESYVKE VVGDNRDDDD LRKASSPIKR VSLVERKALV RYKRSGSSLT KPRERDNKIQ KLNHREEEKK ERQREVVRVV TKQPSNVVYT CAHCGKENTG
0401: NPESHSSFIR PHSIRDEIED VNNFASTNVS KYEDSVSINS GKTTGAPSRP EVENPETGKE LNTPEKPSIS RPEIFTTEKA IDVQVPEEPS RPEIYSSEKA
0501: KEVQAPEMPS RPEVFSSEKA KEIQVPEMPS IPEIQNSEKA KEVQANNRMG LTTPAVAEGL NKSVVTNEHI EDDSDSSISS GDGYESDPTL KDKEVKINNH
0601: SDWRILNGNN KEVDLFRLLV NSVWEKGQLG EEDEADELVS SAEDQSQEQA REDHRKYDDA GLLIIRPPPL IEKFGVEEPQ SPPVVSEIDS EEDRLWEELA
0701: FFTKSNDIGG NELFSNVEKN ISANETPAAQ CKKGKHDLCI DLEVGLKCMH CGFVEREIRS MDVSEWGEKT TRERRKFDRF EEEEGSSFIG KLGFDAPNNS
0801: LNEGCVSSEG TVWDKIPGVK SQMYPHQQEG FEFIWKNLAG TIMLNELKDF ENSDETGGCI MSHAPGTGKT RLTIIFLQAY LQCFPDCKPV IIAPASLLLT
0901: WAEEFKKWNI SIPFHNLSSL DFTGKENSAA LGLLMQKNAT ARSNNEIRMV KIYSWIKSKS ILGISYNLYE KLAGVKDEDK KTKMVREVKP DKELDDIREI
1001: LMGRPGLLVL DEAHTPRNQR SCIWKTLSKV ETQKRILLSG TPFQNNFLEL CNVLGLARPK YLERLTSTLK KSGMTVTKRG KKNLGNEINN RGIEELKAVM
1101: LPFVHVHKGS ILQSSLPGLR ECVVVLNPPE LQRRVLESIE VTHNRKTKNV FETEHKLSLV SVHPSLVSRC KISEKERLSI DEALLAQLKK VRLDPNQSVK
1201: TRFLMEFVEL CEVIKEKVLV FSQYIDPLKL IMKHLVSRFK WNPGEEVLYM HGKLEQKQRQ TLINEFNDPK SKAKVFLAST KACSEGISLV GASRVILLDV
1301: VWNPAVERQA ISRAYRIGQK RIVYTYHLVA KGTPEGPKYC KQAQKDRISE LVFACSSRHD KGKEKIAEAV TEDKVLDTMV EHSKLGDMFD NLIVQPKEAD
1401: LVEGFSILMP
Arabidopsis Description
CLSY3SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.