Factsheet for TraesCS1A01G117300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G118300.1	Wheat	nucleus, plastid	93.98	72.71
TraesCS1B01G137100.1	Wheat	nucleus, plastid	94.51	67.39
HORVU1Hr1G025960.1	Barley	nucleus, plastid	90.18	61.71
TraesCS3A01G520700.1	Wheat	nucleus	14.99	49.31
Os08t0400200-00	Rice	nucleus	53.01	42.8
EES13798	Sorghum	nucleus	51.21	38.49
EES13797	Sorghum	nucleus	44.03	36.87
Zm00001d032343_P001	Maize	plastid	41.29	35.35
Os08t0400000-01	Rice	mitochondrion	32.63	33.33
TraesCS5A01G194500.1	Wheat	plastid	40.44	33.05
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	16.58	29.57
TraesCS1A01G308300.1	Wheat	nucleus	20.91	29.38
TraesCS1A01G362000.1	Wheat	nucleus	20.8	29.14
TraesCS3A01G441200.1	Wheat	nucleus	21.01	28.84
TraesCS5A01G140500.1	Wheat	nucleus	20.59	28.59
Os08t0399300-00	Rice	nucleus	26.08	28.33
TraesCS3A01G457900.1	Wheat	plastid	15.95	27.91
TraesCS2A01G235400.1	Wheat	nucleus	19.32	27.31
TraesCS3A01G336100.1	Wheat	nucleus	21.22	26.98
Zm00001d050267_P001	Maize	peroxisome	16.58	26.48
TraesCS1A01G042900.1	Wheat	nucleus	17.95	26.32
TraesCS3A01G385200.1	Wheat	plastid	19.96	26.03
OQU80395	Sorghum	nucleus	16.26	25.97
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	27.24	25.6
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	8.87	25.3
TraesCS1A01G241600.2	Wheat	nucleus	21.33	24.66
TraesCS4A01G100900.1	Wheat	nucleus	17.42	24.55
TraesCS5A01G197900.1	Wheat	nucleus	25.34	24.19
TraesCS4A01G023500.1	Wheat	nucleus	20.38	23.14
TraesCS2A01G478800.1	Wheat	nucleus	10.88	17.17
TraesCS6A01G226600.1	Wheat	nucleus	11.62	16.15
TraesCS2A01G382000.5	Wheat	nucleus	11.51	16.1
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	12.25	15.57
TraesCS6A01G274600.1	Wheat	nucleus	13.73	7.97

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF471	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS1A01G117300	EnsemblPlants:TraesCS1A01G117300.1	SEG:seg

Description

No Description!

Coordinates

chr1A:+:124479419..124482262

Molecular Weight (calculated)

104484.0 Da

IEP (calculated)

6.650

GRAVY (calculated)

-0.475

Length

947 amino acids

Sequence
(BLAST)

001: MDTIEAVSEN ALDAIVDVQD LEEGEIPPEP DHVLQEFPVT HSNIMHELTA DGLDEKISVN MLQRKGESVS WEVVEDLKVM NKCEGSSPKA ASKPSAEGPL
101: KEHLGDTTEA VSKNALDVIV EVQELEEGEI RTEPDHVLQE NPVTHNNSLH ELTAGTLECV VPSMVDAEPS VRHFSNEKIP VNMLEHKGES VSWEVAEDLK
201: VMNKCEGNSP KGACKPPPED PLKEYLGDKK VSESCSMKSA PLDVEAGVHG DGIMRRMVTF TARKPSPEQG NPSKGASKPS PEDPLKEYLG DKEVSESYSM
301: KRASLDVAAG VHGDGIMRRM VSFTARKTFR LPVEANHKSA LVNLDRPCSM GKEKESVVTM SESFAPRKKL KIKGPAQSKY LPMNTISSKE KLKHEEASHL
401: EDDEVLNAIA VHEGKFEMYL NDPSWRHMQH GGQTADARSK VRMICRRFQF ICRTLVQAVE QGSLKSRRID LAADKLIRKL PGFTKQGPIV GKVPGVEIGD
501: ECLYRVELAI VGLHRPYQGG IDTTKDINDM PIAISIVASG GYPDDLSSSG EIIYTGSGGK PAGKKENEDQ KLVRGNLALK NCIKTKTPVR VIHGFKGPNR
601: EEGSHSKAKE VSVFTYDGLY HVVQCWQEGL PGSRVFKYRL QRISGQPELP LHVAKVLRKS AARPGLCIAD ISQGKEKIPI CVVNNIDAAH PASFKYITRI
701: KGSSLAAKRS HQGCDCTNGC SDSASCACAV KNGGEFPFNF NGAVVHAKPL IYECGPSCRC PPSCHSRVSQ HGMKIPLEVF RTTKTGWGVR SLRSISAGSF
801: ICEYVGELLH SDEANQRMND EYLFDIGHNY DIWKGMPSVV PGLSSSAPRS VIMDDDRAFT IDAAEYGNIG RFINHSCSPN LYAQNILWDH GEKRVPHIMF
901: FAAENISPLQ ELTYDYNYEI DHVRDMNGEV KVKYCHCGSP QCRDRLY

Best Arabidopsis Sequence Match ( AT2G35160.5 )
(BLAST)

001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.