Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G363700.1 | Wheat | nucleus | 97.21 | 97.63 |
| TraesCS2D01G344000.2 | Wheat | nucleus | 97.42 | 96.7 |
| HORVU2Hr1G084110.2 | Barley | plastid | 85.73 | 84.19 |
| Os04t0486800-01 | Rice | nucleus | 79.29 | 79.81 |
| Zm00001d025722_P002 | Maize | nucleus | 75.75 | 76.08 |
| EES12342 | Sorghum | plastid | 77.58 | 74.84 |
| OQU81827 | Sorghum | cytosol, extracellular | 12.77 | 66.48 |
| GSMUA_Achr6P28390_001 | Banana | cytosol, nucleus, plastid | 32.4 | 62.01 |
| VIT_01s0010g02590.t01 | Wine grape | mitochondrion | 45.28 | 61.34 |
| GSMUA_Achr6P28400_001 | Banana | cytosol, plastid | 12.66 | 58.42 |
| KRH58739 | Soybean | cytosol | 10.84 | 58.05 |
| KRH42637 | Soybean | nucleus | 50.32 | 51.88 |
| AT1G27880.1 | Thale cress | nucleus | 48.07 | 49.18 |
| CDY03955 | Canola | nucleus | 48.39 | 48.97 |
| Solyc05g014690.1.1 | Tomato | nucleus | 51.72 | 48.1 |
| Bra030065.1-P | Field mustard | nucleus | 49.03 | 47.02 |
| CDY15702 | Canola | nucleus | 49.03 | 47.02 |
| TraesCS4A01G170100.1 | Wheat | nucleus | 17.06 | 25.6 |
| TraesCS4A01G178600.5 | Wheat | nucleus | 16.95 | 22.44 |
| TraesCS6A01G339900.1 | Wheat | nucleus | 16.09 | 19.68 |
| TraesCS1A01G091400.2 | Wheat | nucleus | 16.2 | 17.4 |
| TraesCS2A01G103300.1 | Wheat | nucleus | 16.31 | 17.02 |
| TraesCS2A01G304900.1 | Wheat | nucleus | 18.99 | 14.74 |
| Solyc09g018690.2.1 | Tomato | nucleus | 2.47 | 4.54 |
| CDX97959 | Canola | nucleus | 1.18 | 4.12 |
| CDX89177 | Canola | nucleus | 1.18 | 4.12 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DNA_helicase_ATP-dep_RecQ | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006310 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008026 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016787 |
| GO:GO:0042631 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR13710 |
| PANTHER:PTHR13710:SF108 | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00614 | EnsemblPlantsGene:TraesCS2A01G345300 |
| EnsemblPlants:TraesCS2A01G345300.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:+:583827537..583836221
Molecular Weight (calculated)
103427.0 Da
IEP (calculated)
8.861
GRAVY (calculated)
-0.322
Length
932 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSSLHAADS DSDDSLLSDV SASPTRRCSP SPRPAPPKHR PTPDPTSKPK RKPKPKPKPV PCSTSAPVSA SASASAPPIR AAALSDPHGL AARIAPGSAL
101: TSNASTVSFS SFRRLVQSRN LSFEPAAAFT NPAPAPELEP EPEPEPAEIP SAEPSPSPAA THPPPQLRPK RVHPNSVSEV PAAAVEQPKR PRGDPAGNFV
201: RLNINGYGRK KSFKSQARRP TKYRSWKRQQ PGGGKPRAGA DEEGDFVAEA LLEREKNAAA GDDGVLKIVE VAREDPSEQN LESLLRKVFG YDSFREGQLE
301: AIQNVVAGES TVLVLPTGAG KSLCYQLPAM ILPGLTLVVS PLLSLMVDQL RKLPAFLPGG LLASSQTSDE FHGTLRLLRA GEIKVLFVSP ERFLNEEFLQ
401: IFRDTLPISL VVIDEAHCIS EWSHNFRPSY LRLRASLLRR KLNIQCILAM TATATTQTLQ EIVNALEIPS GNLIQTSQIR ENLKLSISMS NNRLKDLMLL
501: LKSSPFVNMR SIIVYCKFQT ETDYVCKHLC DNNINAKSYH SGLLMKKRSR VQELFCSNKI RVVVATVAFG MGLDKSDVEG VIHYRLPESL EEYIQETGRA
601: GRDGRLSHCH LLFDSTTFYK IRSLSHSDGI DEYAMSKFLN QIFSSGNTMG CICSFPKEST SRKFDIKEEV LLTVLTQLEI GEEQYLHLLP QFSVTCTLYF
701: HKTSPQLLAD KDILLRSILN KSEMKDGSYV FEVPRVANDM RITMNEVFDR LQKLKFSGEL SYELKDPAYC YMILKRPDDL NTLSANLTKW LSEVENSKIR
801: KLDAMFALAD FAVKGCKKTD GCSGSEHTPC IQKRIIHYFS KKDGTPDDDY CTPLRKSSTF LQSDIKVFLQ SNSFAKFTPR AVARIMHGIS SPAFPAATWA
901: KNHFWERYME VDFPVVIEAA KAELVKFVGK GE
101: TSNASTVSFS SFRRLVQSRN LSFEPAAAFT NPAPAPELEP EPEPEPAEIP SAEPSPSPAA THPPPQLRPK RVHPNSVSEV PAAAVEQPKR PRGDPAGNFV
201: RLNINGYGRK KSFKSQARRP TKYRSWKRQQ PGGGKPRAGA DEEGDFVAEA LLEREKNAAA GDDGVLKIVE VAREDPSEQN LESLLRKVFG YDSFREGQLE
301: AIQNVVAGES TVLVLPTGAG KSLCYQLPAM ILPGLTLVVS PLLSLMVDQL RKLPAFLPGG LLASSQTSDE FHGTLRLLRA GEIKVLFVSP ERFLNEEFLQ
401: IFRDTLPISL VVIDEAHCIS EWSHNFRPSY LRLRASLLRR KLNIQCILAM TATATTQTLQ EIVNALEIPS GNLIQTSQIR ENLKLSISMS NNRLKDLMLL
501: LKSSPFVNMR SIIVYCKFQT ETDYVCKHLC DNNINAKSYH SGLLMKKRSR VQELFCSNKI RVVVATVAFG MGLDKSDVEG VIHYRLPESL EEYIQETGRA
601: GRDGRLSHCH LLFDSTTFYK IRSLSHSDGI DEYAMSKFLN QIFSSGNTMG CICSFPKEST SRKFDIKEEV LLTVLTQLEI GEEQYLHLLP QFSVTCTLYF
701: HKTSPQLLAD KDILLRSILN KSEMKDGSYV FEVPRVANDM RITMNEVFDR LQKLKFSGEL SYELKDPAYC YMILKRPDDL NTLSANLTKW LSEVENSKIR
801: KLDAMFALAD FAVKGCKKTD GCSGSEHTPC IQKRIIHYFS KKDGTPDDDY CTPLRKSSTF LQSDIKVFLQ SNSFAKFTPR AVARIMHGIS SPAFPAATWA
901: KNHFWERYME VDFPVVIEAA KAELVKFVGK GE
001: MDFDSDSDGS HVSATPPRDS FPSSPPQLQS PAKHVPPVSR KMTSSSSRSK PKAPTHPPPN PSQEAPVPSP YPPPPPPSPL FTNLPFRICQ SQPARFSSSV
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
Arabidopsis Description
RECQL5ATP-dependent DNA helicase Q-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.