Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81827 Sorghum cytosol, extracellular 19.51 53.07
VIT_01s0010g02590.t01 Wine grape mitochondrion 60.78 43.02
Zm00001d025722_P002 Maize nucleus 62.63 32.87
Os04t0486800-01 Rice nucleus 61.81 32.51
TraesCS2B01G363700.1 Wheat nucleus 61.81 32.44
TraesCS2A01G345300.1 Wheat nucleus 62.01 32.4
TraesCS2D01G344000.2 Wheat nucleus 61.81 32.06
EES12342 Sorghum plastid 63.45 31.99
HORVU2Hr1G084110.2 Barley plastid 60.99 31.3
GSMUA_AchrUn_... Banana nucleus 26.9 31.19
KRH42637 Soybean nucleus 57.49 30.97
AT1G27880.1 Thale cress nucleus 56.67 30.3
CDY03955 Canola nucleus 56.88 30.08
CDY15702 Canola nucleus 57.91 29.01
Bra030065.1-P Field mustard nucleus 57.91 29.01
Solyc05g014690.1.1 Tomato nucleus 58.73 28.54
GSMUA_Achr4P27590_001 Banana nucleus 26.28 17.95
GSMUA_Achr3P10310_001 Banana endoplasmic reticulum, nucleus, plasma membrane 26.28 16.56
GSMUA_Achr8P06700_001 Banana nucleus 20.12 12.25
GSMUA_Achr6P17780_001 Banana nucleus 27.93 11.46
GSMUA_Achr10P... Banana nucleus 19.51 10.2
KRH58739 Soybean cytosol 0.62 1.72
GSMUA_Achr6P28400_001 Banana cytosol, plastid 0.62 1.49
Solyc09g018690.2.1 Tomato nucleus 1.23 1.18
CDX97959 Canola nucleus 0.0 0.0
CDX89177 Canola nucleus 0.0 0.0
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1InterPro:DEAD/DEAH_box_helicase_domInterPro:DNA/RNA_helicase_DEAH_CSInterPro:DNA_helicase_ATP-dep_RecQGO:GO:0000166
GO:GO:0003674GO:GO:0003676GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0006139
GO:GO:0006259GO:GO:0006310GO:GO:0008026GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787EnsemblPlantsGene:GSMUA_Achr6G28390_001EnsemblPlants:GSMUA_Achr6P28390_001EnsemblPlants:GSMUA_Achr6T28390_001InterPro:Helicase_ATP-bdInterPro:Helicase_C
InterPro:IPR001650InterPro:IPR014001UniProt:M0TAY4InterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271
ScanProsite:PS00690PFscan:PS51192PFscan:PS51194PANTHER:PTHR13710PANTHER:PTHR13710:SF108SMART:SM00487
SMART:SM00490SUPFAM:SSF52540TIGRFAMs:TIGR00614UniParc:UPI000294C267SEG:seg:
Description
ATP-dependent DNA helicase Q-like 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G28390_001]
Coordinates
chr6:+:28755049..28761267
Molecular Weight (calculated)
54668.6 Da
IEP (calculated)
6.508
GRAVY (calculated)
0.022
Length
487 amino acids
Sequence
(BLAST)
001: MMVAREDPSD ENLQRLLKLT HGYGSFREGQ LEAIKRVLAG ESTMLMLPTG AGKSLCYELP ALILPGVTLV VSPLMALMVD QLRKLPSSIP GGLLSSTQTN
101: DEASETLRRL HEGNVKVLFV SPERFLSADF LSIFGNELSI SLLVIDEAHC ISEWSHNFRP SYLRLRASIL QRKLGVQCIL AMTATATTQT FHDIMCALEI
201: PHANVIKMCR VRENLQLFVT MSENRQLDVK EILDLLTSKD KKTFPLMKMI DSTMIVAVVD YKSSAMTYGL IDLQHEENIT AEKFIPDNKK VSVVVCYEKL
301: TTETDMVSKF LCDNNIPAKA YHSGIPAKNR VRTQELFCSN KIRVVVATVA FGMGLDKSDV QAVIHYSMPA SLEEYIQETG RAGRDGKLSY CHLFLDITTY
401: HKLHSLSYSD GVDEYSVSKF LSQVFSSDVH LTGQTCSLVK ESMSRKFDMK EEVLLTILTQ LEIGDEQYLS LLPLLNVTCS LYFHKVF
Best Arabidopsis Sequence Match ( AT1G27880.1 )
(BLAST)
001: MDFDSDSDGS HVSATPPRDS FPSSPPQLQS PAKHVPPVSR KMTSSSSRSK PKAPTHPPPN PSQEAPVPSP YPPPPPPSPL FTNLPFRICQ SQPARFSSSV
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
Arabidopsis Description
RECQL5ATP-dependent DNA helicase Q-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVW7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.