Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12342 | Sorghum | plastid | 93.1 | 89.44 |
| Os04t0486800-01 | Rice | nucleus | 79.74 | 79.91 |
| TraesCS2A01G345300.1 | Wheat | nucleus | 76.08 | 75.75 |
| TraesCS2B01G363700.1 | Wheat | nucleus | 75.65 | 75.65 |
| TraesCS2D01G344000.2 | Wheat | nucleus | 75.86 | 74.97 |
| OQU81827 | Sorghum | cytosol, extracellular | 13.9 | 72.07 |
| HORVU2Hr1G084110.2 | Barley | plastid | 70.58 | 69.02 |
| GSMUA_Achr6P28390_001 | Banana | cytosol, nucleus, plastid | 32.87 | 62.63 |
| VIT_01s0010g02590.t01 | Wine grape | mitochondrion | 44.94 | 60.61 |
| KRH58739 | Soybean | cytosol | 10.99 | 58.62 |
| GSMUA_Achr6P28400_001 | Banana | cytosol, plastid | 12.5 | 57.43 |
| KRH42637 | Soybean | nucleus | 51.94 | 53.32 |
| AT1G27880.1 | Thale cress | nucleus | 48.17 | 49.07 |
| CDY03955 | Canola | nucleus | 48.17 | 48.53 |
| Solyc05g014690.1.1 | Tomato | nucleus | 51.29 | 47.51 |
| Bra030065.1-P | Field mustard | nucleus | 48.17 | 45.99 |
| CDY15702 | Canola | nucleus | 48.17 | 45.99 |
| Zm00001d048672_P001 | Maize | nucleus | 17.35 | 25.56 |
| Zm00001d018287_P001 | Maize | nucleus | 15.84 | 19.95 |
| Zm00001d030366_P007 | Maize | nucleus | 15.19 | 17.98 |
| Zm00001d010866_P004 | Maize | nucleus | 15.84 | 16.94 |
| Zm00001d015212_P006 | Maize | nucleus | 18.32 | 14.47 |
| Solyc09g018690.2.1 | Tomato | nucleus | 2.59 | 4.73 |
| CDX97959 | Canola | nucleus | 1.08 | 3.75 |
| CDX89177 | Canola | nucleus | 1.08 | 3.75 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6J8X3 | ProteinID:AQK44371.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA_helicase_ATP-dep_RecQ |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006310 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0008026 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0009991 | GO:GO:0016787 | GO:GO:0042631 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR13710 | PANTHER:PTHR13710:SF108 | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00614 |
| UniParc:UPI000842C171 | EnsemblPlantsGene:Zm00001d025722 | EnsemblPlants:Zm00001d025722_P002 | EnsemblPlants:Zm00001d025722_T002 | SEG:seg | : |
Description
ATP-dependent DNA helicase Q-like 5
Coordinates
chr10:+:127556445..127565804
Molecular Weight (calculated)
102359.0 Da
IEP (calculated)
8.688
GRAVY (calculated)
-0.259
Length
928 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSQLVDGDS DSEGSLISDI SASPPRGRSP SPPPPPPPPP EHRPNPKHTA TVKPKPPKSK AKPKLAASAC TAAVSPPPLP SAALSDPHGL VSRIAAAPAL
101: VTATSTVSSS SFRRLVQSRN PSFDPAAAFS APTPAPTLAP TEIATAATAQ CPAPDAPPQT RPKRVHPNSV SEVVPPAAEA EQPKRPRGGA EGNFVRLNIN
201: GYGRRRTFRN AQARRPTKYR SWRRQRHGGA KPQGRGDEEG DFVAEAMIER EKKRAGGDGG VLEAVEAARE DPSEQNLENL LRIIYGYNSF REGQLEAIQK
301: VVAGESTMLV LPTGAGKSLC YQVPAMILPG LTLVVSPLLS LMVDQLMKLP AFLPGGFLAS NQTSDEFHET LQRLRGGEIK VLFVSPERFL NEEFLLIFRD
401: GLQISLVAID EAHCISEWSH NFRPSYLRLR ASLLRRKLNV QSILAMTATA TTQTLEEIVT VLEIPSDNLI KTSQIRDNLQ LFISMSNNRL KDLLLLLKAS
501: PFVDMKSIIV YCKFQGETDY VSKYLCDNNI TAKSYHSGLL MKNRNRVQEL FCSNKIRVVV ATVAFGMGLD KSDVEGVIHY SLPESLEEYI QETGRAGRDG
601: RLSYCHLFLD STTFYKSRSL LHSDGVDEYA MSKFLFQVFS CENSVGCICS LVKESTSRKF DIKEEVLFTV LTQLEIGGQQ YLRLLPQFSV TCTLYFHKTS
701: PQLLADKDVL VRSVLDKSET KGGHFVFDMT KVANDLSITV NEVFDHLQQL KFSGEISFEL KDPACIYVIL KKPDDLNALS ADITRWLSEV ENSKISKLDA
801: MFDLANFAVK GCQRTDGCSG SQHTPCIQKK IIQYFSKNYS TSDSGQCTQP QRGSPFLQAD IKVFLKSNSF AKFTPRAVAR IMHGISSPAF PSATWSKNHF
901: WGRYLEVDFP VVMEAAKAEL VKLVGKGE
101: VTATSTVSSS SFRRLVQSRN PSFDPAAAFS APTPAPTLAP TEIATAATAQ CPAPDAPPQT RPKRVHPNSV SEVVPPAAEA EQPKRPRGGA EGNFVRLNIN
201: GYGRRRTFRN AQARRPTKYR SWRRQRHGGA KPQGRGDEEG DFVAEAMIER EKKRAGGDGG VLEAVEAARE DPSEQNLENL LRIIYGYNSF REGQLEAIQK
301: VVAGESTMLV LPTGAGKSLC YQVPAMILPG LTLVVSPLLS LMVDQLMKLP AFLPGGFLAS NQTSDEFHET LQRLRGGEIK VLFVSPERFL NEEFLLIFRD
401: GLQISLVAID EAHCISEWSH NFRPSYLRLR ASLLRRKLNV QSILAMTATA TTQTLEEIVT VLEIPSDNLI KTSQIRDNLQ LFISMSNNRL KDLLLLLKAS
501: PFVDMKSIIV YCKFQGETDY VSKYLCDNNI TAKSYHSGLL MKNRNRVQEL FCSNKIRVVV ATVAFGMGLD KSDVEGVIHY SLPESLEEYI QETGRAGRDG
601: RLSYCHLFLD STTFYKSRSL LHSDGVDEYA MSKFLFQVFS CENSVGCICS LVKESTSRKF DIKEEVLFTV LTQLEIGGQQ YLRLLPQFSV TCTLYFHKTS
701: PQLLADKDVL VRSVLDKSET KGGHFVFDMT KVANDLSITV NEVFDHLQQL KFSGEISFEL KDPACIYVIL KKPDDLNALS ADITRWLSEV ENSKISKLDA
801: MFDLANFAVK GCQRTDGCSG SQHTPCIQKK IIQYFSKNYS TSDSGQCTQP QRGSPFLQAD IKVFLKSNSF AKFTPRAVAR IMHGISSPAF PSATWSKNHF
901: WGRYLEVDFP VVMEAAKAEL VKLVGKGE
001: MDFDSDSDGS HVSATPPRDS FPSSPPQLQS PAKHVPPVSR KMTSSSSRSK PKAPTHPPPN PSQEAPVPSP YPPPPPPSPL FTNLPFRICQ SQPARFSSSV
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
Arabidopsis Description
RECQL5ATP-dependent DNA helicase Q-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.