Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58739 | Soybean | cytosol | 48.51 | 56.32 |
| VIT_01s0010g02590.t01 | Wine grape | mitochondrion | 62.38 | 18.31 |
| TraesCS2B01G363700.1 | Wheat | nucleus | 59.41 | 12.93 |
| TraesCS2D01G344000.2 | Wheat | nucleus | 59.41 | 12.78 |
| TraesCS2A01G345300.1 | Wheat | nucleus | 58.42 | 12.66 |
| Os04t0486800-01 | Rice | nucleus | 57.92 | 12.63 |
| Zm00001d025722_P002 | Maize | nucleus | 57.43 | 12.5 |
| EES12342 | Sorghum | plastid | 59.41 | 12.42 |
| KRH42637 | Soybean | nucleus | 55.45 | 12.39 |
| HORVU2Hr1G084110.2 | Barley | plastid | 57.92 | 12.33 |
| CDY03955 | Canola | nucleus | 53.47 | 11.73 |
| AT1G27880.1 | Thale cress | nucleus | 50.99 | 11.31 |
| Bra030065.1-P | Field mustard | nucleus | 52.97 | 11.01 |
| CDY15702 | Canola | nucleus | 52.97 | 11.01 |
| Solyc05g014690.1.1 | Tomato | nucleus | 51.49 | 10.38 |
| CDX97959 | Canola | nucleus | 4.95 | 3.75 |
| CDX89177 | Canola | nucleus | 4.95 | 3.75 |
| GSMUA_Achr4P27590_001 | Banana | nucleus | 9.41 | 2.66 |
| GSMUA_Achr10P... | Banana | nucleus | 11.88 | 2.58 |
| Solyc09g018690.2.1 | Tomato | nucleus | 6.44 | 2.56 |
| GSMUA_Achr3P10310_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 9.41 | 2.46 |
| GSMUA_Achr8P06700_001 | Banana | nucleus | 7.92 | 2.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 3.96 | 1.9 |
| GSMUA_Achr6P17780_001 | Banana | nucleus | 9.9 | 1.68 |
| GSMUA_Achr6P28390_001 | Banana | cytosol, nucleus, plastid | 1.49 | 0.62 |
| OQU81827 | Sorghum | cytosol, extracellular | 0.5 | 0.56 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P28400_001 | EnsemblPlants:GSMUA_Achr6T28400_001 | EnsemblPlantsGene:GSMUA_Achr6G28400_001 | SEG:seg | UniParc:UPI000295B3E4 | UniProt:M0TAY5 |
| MapMan:35.1 | : | : | : | : | : |
Description
ATP-dependent DNA helicase Q-like 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G28400_001]
Coordinates
chr6:+:28765695..28768021
Molecular Weight (calculated)
22517.1 Da
IEP (calculated)
9.715
GRAVY (calculated)
-0.158
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTVANGVGI KTANLLNKLQ NLKSSGEVTY DLKDPAFCFT IVKKPDDFCS LSANLTKRLA KVESCKVQKL DTMFSVAWSA VKVCKGTDGC SNSLHSTCIQ
101: RRILDYFSRR HDVLDDTNIS FKTARSSPFL RADIKVFLQS NSYTNFTPRA VARIMHGITS PAFPSSTWSK SHFWGRYVEV DFPVVMEAAK VELMNFAGKC
201: GH
101: RRILDYFSRR HDVLDDTNIS FKTARSSPFL RADIKVFLQS NSYTNFTPRA VARIMHGITS PAFPSSTWSK SHFWGRYVEV DFPVVMEAAK VELMNFAGKC
201: GH
001: MDFDSDSDGS HVSATPPRDS FPSSPPQLQS PAKHVPPVSR KMTSSSSRSK PKAPTHPPPN PSQEAPVPSP YPPPPPPSPL FTNLPFRICQ SQPARFSSSV
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
101: SSFSRLCSRA SFTSVEKLKS DGVDFVPEPP LVEVIAPPKS VRRKPPNLIT DTITSPPVKP MVFRSNGNGE GNFVKLNLNG KRGKKFPSKY KGVSKSRSSY
201: SFRGKRYKKK EADGDGESLL EEESDLQKQI EDEANGFISS VEDAILAVKT EASDENLTKL LNLVYGYDSF RDGQLQAIKM ILGGSSTMLV LPTGAGKSLC
301: YQIPAMILPG ITLVVSPLVS LMIDQLKHLP SIIKGGLLSS SQRPEEATET LRKLKEGIIK VLFVSPERLL NVEFLSMFRM SLSVSLVVVD EAHCVSEWSH
401: NFRPSYMRLK ASMLFSELKA ECILAMTATA TTMTLQAVMS SLEIPSTNLI QKSQLRDNFE LSVSLSGANR MKDLLILMES PPYKEIRSII VYCKFQYETD
501: MISKYLRDNN INAKGYHSGL PAKDRVRIQE SFCSNKIRVV VATVAFGMGL DKGDVGAVIH FSVPGSMEEY VQEIGRAGRD GRLSYCHLFY DNDTYLKLRS
601: LAHSDGVDEY AVGKFLTHVF STETKQHEKI CSLVIESASQ KFDMKEEVMQ TILTHLELGE VQYLRMLPQL NICCTLNFHK SSPNTLAARS AIVAAILKKS
701: HVKQGLHVFD IPAVASSICV ATTDVLAEIQ ALKMKGEVTY ELKDSAFCYT ILKSPKEICS LSSHLTKWLT EIESCKVRKL DIMSSAAVAA ISVSNTSELS
801: SGAKQTRSLQ SRIFDYFNGD EKCDSPSKAT QNCAFLRADI KVFLQSNRQA KFTPRAIARI MHGVGSPAFP NSVWSKTHFW GRYMNVDFRV IMEAAQTELF
901: NFVDRNAALA T
Arabidopsis Description
RECQL5ATP-dependent DNA helicase Q-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.