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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G231800.1 Wheat cytosol 97.1 97.1
TraesCS4B01G084200.1 Wheat cytosol 94.42 94.0
HORVU4Hr1G014490.3 Barley cytosol, plastid 91.74 90.33
Os11t0265200-00 Rice extracellular 74.11 72.65
EES09667 Sorghum cytosol 70.31 70.16
Zm00001d049083_P002 Maize cytosol 66.96 66.67
GSMUA_Achr1P13390_001 Banana cytosol 54.91 59.42
VIT_05s0102g01140.t01 Wine grape cytosol 52.9 53.38
Bra030639.1-P Field mustard cytosol 47.77 50.59
CDY15562 Canola cytosol 47.77 50.59
PGSC0003DMT400042138 Potato cytosol 50.0 50.56
CDX86535 Canola cytosol 48.44 50.23
Solyc06g053340.2.1 Tomato cytosol 49.33 49.89
KRH29609 Soybean cytosol 48.44 48.98
KRH24605 Soybean cytosol 48.21 48.76
AT1G06110.1 Thale cress cytosol 47.32 48.62
VIT_05s0102g01150.t01 Wine grape cytosol 49.11 47.72
CDY10172 Canola cytosol 43.08 44.47
CDY47716 Canola cytosol 35.27 41.58
Bra015474.1-P Field mustard cytosol 36.38 41.06
Protein Annotations
EnsemblPlants:TraesCS4D01G082100.1EnsemblPlantsGene:TraesCS4D01G082100Gene3D:2.60.40.1470GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0019005InterPro:ApaG_domainInterPro:ApaG_sfInterPro:IPR007474InterPro:IPR036767ncoils:Coil
PANTHER:PTHR14289PANTHER:PTHR14289:SF26PFAM:PF04379PFscan:PS51087SEG:segSUPFAM:SSF110069
SUPFAM:SSF160631MapMan:35.1::::
Description
No Description!
Coordinates
chr4D:+:55559928..55564146
Molecular Weight (calculated)
49193.2 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.057
Length
448 amino acids
Sequence
(BLAST)
001: MASPPTGPAA PAGLESMEGL ALDIIIAKAG ARPAAALACA STHLRAAVAE DAVWRSFCAR DLGLDAPLDP EDRPLPSFKD AYKVWSESFG MYPLPLVKRV
101: KLFWSSLKGW ISENFPEALR TLSKGASEAQ IRSAEDDLGF KLPMPTKLLY RFCNGQLPFS KNEDIRMAPL GIIGGYVFYN YNVNVHLSSL EQMVEETKEF
201: NLHLEEQGLP IGPNLALVAS SWYHPKTFLL NCSSGDLYVG TANLSAGEMM PCVPESLIKP TNSDMPQDGL LLWLEEHLRR LQNGMIKIRP LSTSRYICLY
301: PEASPLCSSA VTNGVKVRAS AVFVPEHPRR GHLGTHLYSY SIRLSVPEAC MLGGVYFSSC QLHSRHWIIR CKDTVVSDMH GEGVIGEHPL LLPGQDEFVY
401: ESCTPLNGSS GSVEGSFTFV PGRLTQPEGK PFDVTVAPFP LEVPDYIF
Best Arabidopsis Sequence Match ( AT1G06110.1 )
(BLAST)
001: MGLEDAGDLV LHIVLSKIGP ENTARVACVS KRLKVSASEE SLWSIFCSND LNISTPLDPH GDPAPSFKRA YQLWRESFRM YPWNLVKRVR LCWDNLKQWL
101: TLNFPEAKAT LRKGVTEDDL QEFETSLKVK LPLPTRLLYR FVDGQELSSP NGLDGSLGLI GGYSAYSHDV NVYLLPLKEV MRETKESFMR DLGFSSRLDL
201: IVMAASVVAS LKIFLLDCTT GQLFTGTSNR QLLPCVPDAL VRSVHDTNGD QQQDAMLLWL EEHGRRLQTG TINVRQQNNV KSISLFPEIP PLCSVSVTNG
301: VQVRASSVFI PEISNLRDQP PAYWYAYSIR MSLMPEGCIL NGTHHSSCQL YWRHWVIRAD NEVIDNVNGE AVIGKYPLLQ AGEEEFVYES CSSFPTTAGS
401: IDGSFTFVPG SLRDPKGSQF EVKVVEFPLE LPDYIF
Arabidopsis Description
SKIP16F-box protein SKIP16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LND7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.