Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11313 | Soybean | nucleus, plastid | 63.37 | 63.73 |
| KRH20958 | Soybean | nucleus, plastid | 63.15 | 63.65 |
| KRH02160 | Soybean | nucleus | 61.46 | 62.37 |
| KRH50955 | Soybean | nucleus | 60.79 | 60.79 |
| PGSC0003DMT400081760 | Potato | plastid | 61.24 | 60.49 |
| Solyc01g080430.2.1 | Tomato | nucleus | 58.2 | 60.44 |
| GSMUA_Achr3P23730_001 | Banana | nucleus | 39.66 | 48.89 |
| GSMUA_Achr2P01510_001 | Banana | nucleus | 42.47 | 46.84 |
| GSMUA_Achr3P09160_001 | Banana | nucleus | 37.19 | 45.1 |
| EER99333 | Sorghum | nucleus, plastid | 32.92 | 34.55 |
| TraesCS1A01G084200.1 | Wheat | cytosol | 33.71 | 34.52 |
| TraesCS1B01G101700.1 | Wheat | cytosol | 33.71 | 34.48 |
| TraesCS1D01G085400.1 | Wheat | cytosol | 33.48 | 34.25 |
| HORVU1Hr1G018310.1 | Barley | cytosol | 33.48 | 34.21 |
| Zm00001d006317_P002 | Maize | plastid | 32.25 | 33.53 |
| VIT_02s0012g01020.t01 | Wine grape | nucleus | 26.74 | 32.92 |
| Os05t0141500-01 | Rice | nucleus, plastid | 31.69 | 32.49 |
| Zm00001d021404_P001 | Maize | cytosol | 32.81 | 25.82 |
| OQU88874 | Sorghum | nucleus | 20.79 | 23.42 |
| Zm00001d005154_P001 | Maize | nucleus | 20.0 | 22.62 |
| Os05t0141400-01 | Rice | plastid | 3.93 | 15.62 |
Protein Annotations
| EntrezGene:100249384 | wikigene:100249384 | Gene3D:3.30.40.10 | MapMan:35.1 | ProteinID:CCB50368 | ProteinID:CCB50368.1 |
| ncoils:Coil | UniProt:F6HDJ7 | EMBL:FN595749 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009966 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR001841 | InterPro:IPR013083 | EntrezGene:LOC100249384 | wikigene:LOC100249384 |
| PFAM:PF13920 | PFscan:PS50089 | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF141 | SUPFAM:SSF57850 | UniParc:UPI00021095F5 |
| ArrayExpress:VIT_05s0020g02320 | EnsemblPlantsGene:VIT_05s0020g02320 | EnsemblPlants:VIT_05s0020g02320.t01 | unigene:Vvi.5834 | RefSeq:XP_002277269 | RefSeq:XP_002277269.1 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5:-:4019363..4024724
Molecular Weight (calculated)
97798.1 Da
IEP (calculated)
6.844
GRAVY (calculated)
-0.659
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNGSSTCG TQGSPSVSAQ EKGSRNKRKF RADPPLGDPN KIVSSQDQCL SYEFSAEKFE VTSSHGQPGA CGMCNLNQDH SDGLKLDLGL SSAAGSSEVG
101: PSQPRDELEA DDFQDADWSD LTESQLEELV LSNLDTIFKS AIKKIVACGY SEEVATKAVL RSGLCYGCKD TVSNIVDNTL AFLRNGQEID PSREHYFDDL
201: QQLEKYILAE LVCVLREVRP FFSTGDAMWC LLICDMNVSH ACAMDGDSFS SIVSGDGASN GSSSTSGQPQ SKTEAKSSEL NLPNPCNPVH SIPCAHSSQS
301: ETPIASGVPN LAKPKNSLVL NGLVSEKDGL NNTSDTTDKS FSVTGTSQSA APEEKFGLSR KVHSGGTKRE SMLRQKSLHL EKNYRTYGCK GSSRTAKLSG
401: LGSYMLDKKL KSVSDSTGVN LKNASLKISK AMGVDVPQDN GNHNLSPNSG LSSSAAFNLE TVNTIGSLPK TNSPSALPPV NTPPIPSGAD TELSLSLTTK
501: SNSAPVPLSC NAETSNCSYT GIPYDKSLGQ WVPQDKKDEM ILKLVPRVRE LQNQLQEWTE WANQKVMQAA RRLGKDKAEL KTLRQEKEEV ERLKKEKQTL
601: EDNTAKKLSE MENALGKASG QVERANAAVR RLEVENSSLR QEMEAAKLEA AESAASCQEV SKREKKTLMK FQTWEKQKAF FHEELTSEKR RLAQLRQELE
701: QATELQDQLE ARWKQEEKAK EELLMQASST RKEREQIEVS AKSKEDMIKL KAEANLQKYK DDIQKLEKQI SELRLKTDSS KIAALRRGID GSYASRLTDT
801: INGSAHKESQ APFISEMVTN FHNYAGSGGV KRERECVMCL SEEMSVVFLP CAHQVVCTTC NELHEKQGMK DCPSCRSPIQ RRIRIRYARP
101: PSQPRDELEA DDFQDADWSD LTESQLEELV LSNLDTIFKS AIKKIVACGY SEEVATKAVL RSGLCYGCKD TVSNIVDNTL AFLRNGQEID PSREHYFDDL
201: QQLEKYILAE LVCVLREVRP FFSTGDAMWC LLICDMNVSH ACAMDGDSFS SIVSGDGASN GSSSTSGQPQ SKTEAKSSEL NLPNPCNPVH SIPCAHSSQS
301: ETPIASGVPN LAKPKNSLVL NGLVSEKDGL NNTSDTTDKS FSVTGTSQSA APEEKFGLSR KVHSGGTKRE SMLRQKSLHL EKNYRTYGCK GSSRTAKLSG
401: LGSYMLDKKL KSVSDSTGVN LKNASLKISK AMGVDVPQDN GNHNLSPNSG LSSSAAFNLE TVNTIGSLPK TNSPSALPPV NTPPIPSGAD TELSLSLTTK
501: SNSAPVPLSC NAETSNCSYT GIPYDKSLGQ WVPQDKKDEM ILKLVPRVRE LQNQLQEWTE WANQKVMQAA RRLGKDKAEL KTLRQEKEEV ERLKKEKQTL
601: EDNTAKKLSE MENALGKASG QVERANAAVR RLEVENSSLR QEMEAAKLEA AESAASCQEV SKREKKTLMK FQTWEKQKAF FHEELTSEKR RLAQLRQELE
701: QATELQDQLE ARWKQEEKAK EELLMQASST RKEREQIEVS AKSKEDMIKL KAEANLQKYK DDIQKLEKQI SELRLKTDSS KIAALRRGID GSYASRLTDT
801: INGSAHKESQ APFISEMVTN FHNYAGSGGV KRERECVMCL SEEMSVVFLP CAHQVVCTTC NELHEKQGMK DCPSCRSPIQ RRIRIRYARP
001: MVEKQEEMNE FGAVNGGKVG TSSSVSPPQD KGRKNKRKLA DPSPQNAASL TEFPRYELHS FKSQSPLCEN DSNGQLKAEE SDSVGWDDPF ACHLEGLLSS
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG
Arabidopsis Description
RF298Putative E3 ubiquitin-protein ligase RF298 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPJ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.