Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02160 | Soybean | nucleus | 84.27 | 85.52 |
| KRH20958 | Soybean | nucleus, plastid | 65.73 | 66.25 |
| KRH11313 | Soybean | nucleus, plastid | 64.94 | 65.31 |
| VIT_05s0020g02320.t01 | Wine grape | nucleus | 60.79 | 60.79 |
| PGSC0003DMT400081760 | Potato | plastid | 54.04 | 53.39 |
| Solyc01g080430.2.1 | Tomato | nucleus | 51.12 | 53.09 |
| GSMUA_Achr3P23730_001 | Banana | nucleus | 37.3 | 45.98 |
| GSMUA_Achr2P01510_001 | Banana | nucleus | 40.11 | 44.24 |
| GSMUA_Achr3P09160_001 | Banana | nucleus | 34.72 | 42.1 |
| HORVU1Hr1G018310.1 | Barley | cytosol | 32.02 | 32.72 |
| TraesCS1A01G084200.1 | Wheat | cytosol | 31.8 | 32.57 |
| EER99333 | Sorghum | nucleus, plastid | 31.01 | 32.55 |
| TraesCS1B01G101700.1 | Wheat | cytosol | 31.8 | 32.53 |
| KRH04325 | Soybean | nucleus | 24.61 | 32.25 |
| TraesCS1D01G085400.1 | Wheat | cytosol | 31.46 | 32.18 |
| Zm00001d006317_P002 | Maize | plastid | 30.67 | 31.89 |
| KRH71485 | Soybean | cytosol, endoplasmic reticulum, nucleus | 29.78 | 31.77 |
| KRH58212 | Soybean | nucleus | 25.06 | 31.1 |
| Os05t0141500-01 | Rice | nucleus, plastid | 30.11 | 30.88 |
| KRH28281 | Soybean | nucleus, plastid | 21.24 | 27.92 |
| Zm00001d021404_P001 | Maize | cytosol | 31.46 | 24.76 |
| OQU88874 | Sorghum | nucleus | 20.11 | 22.66 |
| Zm00001d005154_P001 | Maize | nucleus | 19.44 | 21.98 |
| Os05t0141400-01 | Rice | plastid | 3.71 | 14.73 |
Protein Annotations
| EMBL:ACUP02004720 | EnsemblPlants:KRH50955 | EnsemblPlantsGene:GLYMA_07G253800 | EntrezGene:100775512 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF141 |
| PFAM:PF13920 | PFscan:PS50089 | ProteinID:KRH50955 | ProteinID:KRH50955.1 | SEG:seg | SUPFAM:SSF57850 |
| UniParc:UPI0006ED6775 | UniProt:A0A0R0JFD4 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:43084570..43089511
Molecular Weight (calculated)
98885.7 Da
IEP (calculated)
8.035
GRAVY (calculated)
-0.560
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSVSCQEK GSRNKRKFRV DPPLGEPNKF IPAPQLKCFS YEFSAERFEI TPGHGQAAAC DLCGVSQDYS DGLKLGLGLY NPGTSEVGPS QSKDEPETDE
101: INDADWSDLT EAQLEELVLT NLDTILKSAI KKIVACGYTE DVATKAILRP GICYGCKDTL SNIVDNSLAF LRNGQEIDTS REHYFEDLVQ LEKYNLAELV
201: CVLREVRPFF SVGDAMWCLL ICDMNVSHAC AMDCNPLSSL GNDNSTGGPS NQAESLSKAE TKCPEPSLIS PSKSIPTCSH NSQSKKPFVT RIPGVNNLNP
301: QIIGGASEKE GASCGSECIN KAFSAAGTSQ SGLMKEKRGT VRKVHSGSTK RDYILQHKSF HKEKSYRTYG LKGSSRRGKV NGLSGLVLDK KLKSVSESST
401: INLKSASLQI SKAVGIDTTQ DSISVNFSCN AGTSTSTAFS LVNSSDSVCR STNTSFAINA ANTIPVFSCP ASLSATNTDL SLSLSSKIKP STESVCSNNE
501: APNSSYMGIL YNNNNNNKSP RQWIPHDGKD EMILKLLPRV RELQNQLQEW TEWANQKVMQ AARRLSKEKA ELQTLRQEKE EVERLKKEKQ SLEENTLKKL
601: SEMENALCKV SGQVERANAT VRKLEVEKAA LRKEVEAAKI RATETAASCQ EVSRREKKTQ MKFQSWEKQK SLFQEELTIE KRKLAQLLQE LEQARMQQEQ
701: VEGRWQQEAK AKEEFILQAS SIKKEREQIE ESGKSKEDAI KLKAERNRQM YRDDIHKLEK EISQLRLKTD SSKIAALRMG IDGCYASKCL DMKNGTAQKE
801: PRASFISELV IDHSATGGVK REQECVMCLS EEMSVLFMPC AHQVVCKTCN ELHEKQGMQD CPSCRSPIQQ RIAVRFPRFV LLLLHLSLLV
101: INDADWSDLT EAQLEELVLT NLDTILKSAI KKIVACGYTE DVATKAILRP GICYGCKDTL SNIVDNSLAF LRNGQEIDTS REHYFEDLVQ LEKYNLAELV
201: CVLREVRPFF SVGDAMWCLL ICDMNVSHAC AMDCNPLSSL GNDNSTGGPS NQAESLSKAE TKCPEPSLIS PSKSIPTCSH NSQSKKPFVT RIPGVNNLNP
301: QIIGGASEKE GASCGSECIN KAFSAAGTSQ SGLMKEKRGT VRKVHSGSTK RDYILQHKSF HKEKSYRTYG LKGSSRRGKV NGLSGLVLDK KLKSVSESST
401: INLKSASLQI SKAVGIDTTQ DSISVNFSCN AGTSTSTAFS LVNSSDSVCR STNTSFAINA ANTIPVFSCP ASLSATNTDL SLSLSSKIKP STESVCSNNE
501: APNSSYMGIL YNNNNNNKSP RQWIPHDGKD EMILKLLPRV RELQNQLQEW TEWANQKVMQ AARRLSKEKA ELQTLRQEKE EVERLKKEKQ SLEENTLKKL
601: SEMENALCKV SGQVERANAT VRKLEVEKAA LRKEVEAAKI RATETAASCQ EVSRREKKTQ MKFQSWEKQK SLFQEELTIE KRKLAQLLQE LEQARMQQEQ
701: VEGRWQQEAK AKEEFILQAS SIKKEREQIE ESGKSKEDAI KLKAERNRQM YRDDIHKLEK EISQLRLKTD SSKIAALRMG IDGCYASKCL DMKNGTAQKE
801: PRASFISELV IDHSATGGVK REQECVMCLS EEMSVLFMPC AHQVVCKTCN ELHEKQGMQD CPSCRSPIQQ RIAVRFPRFV LLLLHLSLLV
001: MSIVQKQEEM NGCGLNVDKV EAFTVSPQEK GRKNKRKLAD PSQPNASSLT EFPPYELPSL KPQNHLSGNG SVGEVSNQLQ VEVSESVEWD DPFACHLEEL
101: LSSNLLTLFL DTMKQLIDLG YTDDEVLKAV SRCRLYCGGN NLLSNIVNNT LSALKTGDEG AGSGDYVFED LQQLVSYTLV EMISLIKEVR PSLSTVEAMW
201: RLLMCDLNVL QAFEAEGDGL VSSSKLSDSE SLGAESNPPK SSDPDNPKPP QSDPQSNRNE PLKFGNFPNT PNSKKTQSSG TTPGKEVCSG STVSCQGMRS
301: TSFTLVSDEK LVSCRKGRTK KEIAMLRQKS CVEKIRTYSK GSGYKAAKFA SVGSFLLEKR VKSSSEFVPR NSSSKITAEI GVKVSLAEDS GCFVRKNSKL
401: DSPVVVVDAK GYITALPARS VKSASKKKTG SESVTLIPSA SEKKSDSSIP STSEKKSGSE SEEKASVSAK LAPDYYAGIP YDAALGIYVP RDKKDELILK
501: LVPRVNDLQN ELQVWTDWAN QKVKEATGRL LKDQPELKAL RKEREEAEQY KKEKQLLEEN TRKRLSEMDF ALKNATSQLE KAFNTAHRLE LEQSILKKEM
601: EAAKIKAVES AESFREAKER GERSLKDIHS WEGQKIMLQE ELKGQREKVT VLQKEVTKAK NRQNQIEAAL KQERTAKGKL SAQASLIRKE TKELEALGKV
701: EEERIKGKAE TDVKYYIDNI KRLEREISEL KLKSDYSRII ALKKGSSESK ATKRESLGMP KVKRERECVM CLSEEMSVIF LPCAHQVLCF KCNQLHEKEG
801: MMDCPSCRGT IHRRIQARFA RSG
101: LSSNLLTLFL DTMKQLIDLG YTDDEVLKAV SRCRLYCGGN NLLSNIVNNT LSALKTGDEG AGSGDYVFED LQQLVSYTLV EMISLIKEVR PSLSTVEAMW
201: RLLMCDLNVL QAFEAEGDGL VSSSKLSDSE SLGAESNPPK SSDPDNPKPP QSDPQSNRNE PLKFGNFPNT PNSKKTQSSG TTPGKEVCSG STVSCQGMRS
301: TSFTLVSDEK LVSCRKGRTK KEIAMLRQKS CVEKIRTYSK GSGYKAAKFA SVGSFLLEKR VKSSSEFVPR NSSSKITAEI GVKVSLAEDS GCFVRKNSKL
401: DSPVVVVDAK GYITALPARS VKSASKKKTG SESVTLIPSA SEKKSDSSIP STSEKKSGSE SEEKASVSAK LAPDYYAGIP YDAALGIYVP RDKKDELILK
501: LVPRVNDLQN ELQVWTDWAN QKVKEATGRL LKDQPELKAL RKEREEAEQY KKEKQLLEEN TRKRLSEMDF ALKNATSQLE KAFNTAHRLE LEQSILKKEM
601: EAAKIKAVES AESFREAKER GERSLKDIHS WEGQKIMLQE ELKGQREKVT VLQKEVTKAK NRQNQIEAAL KQERTAKGKL SAQASLIRKE TKELEALGKV
701: EEERIKGKAE TDVKYYIDNI KRLEREISEL KLKSDYSRII ALKKGSSESK ATKRESLGMP KVKRERECVM CLSEEMSVIF LPCAHQVLCF KCNQLHEKEG
801: MMDCPSCRGT IHRRIQARFA RSG
Arabidopsis Description
RF4Putative E3 ubiquitin-protein ligase RF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.