Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G101700.1 | Wheat | cytosol | 96.44 | 96.55 |
| TraesCS1D01G085400.1 | Wheat | cytosol | 95.52 | 95.63 |
| TraesCS1A01G084200.1 | Wheat | cytosol | 94.03 | 94.25 |
| EER99333 | Sorghum | nucleus, plastid | 75.2 | 77.24 |
| Os05t0141500-01 | Rice | nucleus, plastid | 73.25 | 73.5 |
| Zm00001d006317_P002 | Maize | plastid | 71.53 | 72.78 |
| Zm00001d021404_P001 | Maize | cytosol | 73.94 | 56.94 |
| Solyc10g050590.1.1 | Tomato | cytosol | 2.41 | 41.18 |
| GSMUA_Achr3P23730_001 | Banana | nucleus | 33.52 | 40.44 |
| Solyc09g074160.1.1 | Tomato | cytosol | 2.76 | 40.0 |
| Bra033393.1-P | Field mustard | nucleus | 12.06 | 39.03 |
| PGSC0003DMT400009741 | Potato | nucleus | 4.94 | 37.72 |
| GSMUA_Achr2P01510_001 | Banana | nucleus | 33.98 | 36.68 |
| CDX91265 | Canola | cytosol, mitochondrion, nucleus | 10.79 | 35.88 |
| CDY22093 | Canola | nucleus | 17.68 | 34.84 |
| VIT_05s0020g02320.t01 | Wine grape | nucleus | 34.21 | 33.48 |
| KRH02160 | Soybean | nucleus | 32.84 | 32.61 |
| PGSC0003DMT400081760 | Potato | plastid | 33.64 | 32.52 |
| Solyc01g080430.2.1 | Tomato | nucleus | 31.92 | 32.44 |
| KRH50955 | Soybean | nucleus | 32.72 | 32.02 |
| KRH11313 | Soybean | nucleus, plastid | 32.49 | 31.98 |
| KRH20958 | Soybean | nucleus, plastid | 32.38 | 31.94 |
| Solyc08g016350.1.1 | Tomato | extracellular | 2.53 | 30.56 |
| Bra036227.1-P | Field mustard | plastid | 23.54 | 29.04 |
| Solyc09g074140.1.1 | Tomato | nucleus | 16.99 | 27.16 |
| AT4G03000.2 | Thale cress | nucleus | 24.45 | 26.17 |
| CDY21932 | Canola | nucleus, plastid | 24.23 | 25.67 |
| AT1G03365.2 | Thale cress | nucleus | 24.23 | 25.64 |
| CDX89896 | Canola | nucleus | 24.57 | 25.54 |
| Solyc10g050610.1.1 | Tomato | nucleus | 9.18 | 25.16 |
| Solyc06g008900.2.1 | Tomato | nucleus | 23.54 | 24.35 |
| PGSC0003DMT400009742 | Potato | nucleus | 22.27 | 23.95 |
| Solyc09g074150.1.1 | Tomato | nucleus | 11.02 | 23.59 |
| KRH71485 | Soybean | cytosol, endoplasmic reticulum, nucleus | 22.16 | 23.14 |
| PGSC0003DMT400074463 | Potato | cytosol | 11.6 | 23.06 |
| Solyc09g074120.1.1 | Tomato | nucleus | 14.24 | 22.71 |
| Solyc09g074200.1.1 | Tomato | nucleus | 21.01 | 22.68 |
| Solyc09g074190.1.1 | Tomato | nucleus | 20.09 | 21.79 |
| Solyc09g074130.1.1 | Tomato | endoplasmic reticulum | 17.34 | 21.7 |
| HORVU5Hr1G058760.1 | Barley | plastid | 18.03 | 21.66 |
| CDY18168 | Canola | nucleus | 11.83 | 19.92 |
| Solyc08g016370.1.1 | Tomato | cytosol, extracellular, plasma membrane | 2.53 | 18.33 |
| Solyc09g074170.1.1 | Tomato | cytosol | 6.08 | 16.56 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G018310.1 | EnsemblPlantsGene:HORVU1Hr1G018310 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF143 | PFAM:PF13920 | PFscan:PS50089 |
| SEG:seg | SUPFAM:SSF57850 | UniParc:UPI000295C08D | UniProt:M0XPD9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr1H:-:66430060..66435252
Molecular Weight (calculated)
95248.5 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.528
Length
871 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVATQEAA SGSTVQEKAG SRNKRKFRAE PPSGELGPFG LEYPLTTDCV GFEFMSPEKA AMAAAAAAAE GVNLDFIPST CDACKAVHAT AEELLECQRY
101: VNWSDPNEAQ LEEILLKSLD TTFDNAVSVI TTMGYSEAAA RAAVVRAAAQ YSWRESLAGF SEAAVEVLKT EGDMLPRDGS SLEDMRKIEQ VVLASLVAVV
201: NEAQPFYTTG DVMFCLLMSD MNVAHACAMD YSAAPLPAVG AQVIAQPVAG NYEPTPTSDL SVSITNPQTG VTFRGKLTPV PPGTYNAVKA DSSTTPVNPN
301: VPSGKPCVSG KMHPVVPNVK PKEHPAATPD HAEEQPFVAA ATQSVKDDKP FPSKRGSSKR DSLHRQKLMS FDKNSRALGS KGSLRSGKHI SCGTVALERK
401: CRQVSDSATC SLKGASKIAK GFAASMKGSE YSVDLSFTAT GTIASIPSFD AKPPSNTDPA SAASTELSLS LPLPLPLPSS SDGSAPSLNH DSSTEAVDPS
501: SKINFAYDED QKVWIPQDKK DEMVLILVQR QKELQAHMRD WTDWAMEKVM QVTRRLAKEK EELQSLRKEK EEASRLHDER HCLEESTRKK LLEMESAISR
601: ANNQLDKADA SARRREAENA QLRMQMEAAK RNAAVSAANF VELSKKDESS LKRSQHWESE RALLQEELAA EKSKLSRVQQ QLQHAKEKKE QLKVRWRQEE
701: ARKTEAIACV SSERKERGQI ETSLRSEENF LHLKAENDMQ RYKSEIRALE QHISQLKVSL DASEAATPKW GTDDKTRALR LSEGRKNGGN NAQVLAKVAG
801: AAALDLDLDD IQRDRECVMC LSEEMSVVFL PCAHQVVCAK CNDLHDKQGM KECPSCRTHI QRRVCARTVG C
101: VNWSDPNEAQ LEEILLKSLD TTFDNAVSVI TTMGYSEAAA RAAVVRAAAQ YSWRESLAGF SEAAVEVLKT EGDMLPRDGS SLEDMRKIEQ VVLASLVAVV
201: NEAQPFYTTG DVMFCLLMSD MNVAHACAMD YSAAPLPAVG AQVIAQPVAG NYEPTPTSDL SVSITNPQTG VTFRGKLTPV PPGTYNAVKA DSSTTPVNPN
301: VPSGKPCVSG KMHPVVPNVK PKEHPAATPD HAEEQPFVAA ATQSVKDDKP FPSKRGSSKR DSLHRQKLMS FDKNSRALGS KGSLRSGKHI SCGTVALERK
401: CRQVSDSATC SLKGASKIAK GFAASMKGSE YSVDLSFTAT GTIASIPSFD AKPPSNTDPA SAASTELSLS LPLPLPLPSS SDGSAPSLNH DSSTEAVDPS
501: SKINFAYDED QKVWIPQDKK DEMVLILVQR QKELQAHMRD WTDWAMEKVM QVTRRLAKEK EELQSLRKEK EEASRLHDER HCLEESTRKK LLEMESAISR
601: ANNQLDKADA SARRREAENA QLRMQMEAAK RNAAVSAANF VELSKKDESS LKRSQHWESE RALLQEELAA EKSKLSRVQQ QLQHAKEKKE QLKVRWRQEE
701: ARKTEAIACV SSERKERGQI ETSLRSEENF LHLKAENDMQ RYKSEIRALE QHISQLKVSL DASEAATPKW GTDDKTRALR LSEGRKNGGN NAQVLAKVAG
801: AAALDLDLDD IQRDRECVMC LSEEMSVVFL PCAHQVVCAK CNDLHDKQGM KECPSCRTHI QRRVCARTVG C
001: MSIVQKQEEM NGCGLNVDKV EAFTVSPQEK GRKNKRKLAD PSQPNASSLT EFPPYELPSL KPQNHLSGNG SVGEVSNQLQ VEVSESVEWD DPFACHLEEL
101: LSSNLLTLFL DTMKQLIDLG YTDDEVLKAV SRCRLYCGGN NLLSNIVNNT LSALKTGDEG AGSGDYVFED LQQLVSYTLV EMISLIKEVR PSLSTVEAMW
201: RLLMCDLNVL QAFEAEGDGL VSSSKLSDSE SLGAESNPPK SSDPDNPKPP QSDPQSNRNE PLKFGNFPNT PNSKKTQSSG TTPGKEVCSG STVSCQGMRS
301: TSFTLVSDEK LVSCRKGRTK KEIAMLRQKS CVEKIRTYSK GSGYKAAKFA SVGSFLLEKR VKSSSEFVPR NSSSKITAEI GVKVSLAEDS GCFVRKNSKL
401: DSPVVVVDAK GYITALPARS VKSASKKKTG SESVTLIPSA SEKKSDSSIP STSEKKSGSE SEEKASVSAK LAPDYYAGIP YDAALGIYVP RDKKDELILK
501: LVPRVNDLQN ELQVWTDWAN QKVKEATGRL LKDQPELKAL RKEREEAEQY KKEKQLLEEN TRKRLSEMDF ALKNATSQLE KAFNTAHRLE LEQSILKKEM
601: EAAKIKAVES AESFREAKER GERSLKDIHS WEGQKIMLQE ELKGQREKVT VLQKEVTKAK NRQNQIEAAL KQERTAKGKL SAQASLIRKE TKELEALGKV
701: EEERIKGKAE TDVKYYIDNI KRLEREISEL KLKSDYSRII ALKKGSSESK ATKRESLGMP KVKRERECVM CLSEEMSVIF LPCAHQVLCF KCNQLHEKEG
801: MMDCPSCRGT IHRRIQARFA RSG
101: LSSNLLTLFL DTMKQLIDLG YTDDEVLKAV SRCRLYCGGN NLLSNIVNNT LSALKTGDEG AGSGDYVFED LQQLVSYTLV EMISLIKEVR PSLSTVEAMW
201: RLLMCDLNVL QAFEAEGDGL VSSSKLSDSE SLGAESNPPK SSDPDNPKPP QSDPQSNRNE PLKFGNFPNT PNSKKTQSSG TTPGKEVCSG STVSCQGMRS
301: TSFTLVSDEK LVSCRKGRTK KEIAMLRQKS CVEKIRTYSK GSGYKAAKFA SVGSFLLEKR VKSSSEFVPR NSSSKITAEI GVKVSLAEDS GCFVRKNSKL
401: DSPVVVVDAK GYITALPARS VKSASKKKTG SESVTLIPSA SEKKSDSSIP STSEKKSGSE SEEKASVSAK LAPDYYAGIP YDAALGIYVP RDKKDELILK
501: LVPRVNDLQN ELQVWTDWAN QKVKEATGRL LKDQPELKAL RKEREEAEQY KKEKQLLEEN TRKRLSEMDF ALKNATSQLE KAFNTAHRLE LEQSILKKEM
601: EAAKIKAVES AESFREAKER GERSLKDIHS WEGQKIMLQE ELKGQREKVT VLQKEVTKAK NRQNQIEAAL KQERTAKGKL SAQASLIRKE TKELEALGKV
701: EEERIKGKAE TDVKYYIDNI KRLEREISEL KLKSDYSRII ALKKGSSESK ATKRESLGMP KVKRERECVM CLSEEMSVIF LPCAHQVLCF KCNQLHEKEG
801: MMDCPSCRGT IHRRIQARFA RSG
Arabidopsis Description
RF4Putative E3 ubiquitin-protein ligase RF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.