Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009741 | Potato | nucleus | 12.35 | 87.72 |
| Solyc09g074200.1.1 | Tomato | nucleus | 75.93 | 76.21 |
| Solyc09g074190.1.1 | Tomato | nucleus | 70.74 | 71.36 |
| Solyc08g016370.1.1 | Tomato | cytosol, extracellular, plasma membrane | 9.63 | 65.0 |
| PGSC0003DMT400074463 | Potato | cytosol | 34.07 | 63.01 |
| Bra033393.1-P | Field mustard | nucleus | 11.73 | 35.32 |
| CDY22093 | Canola | nucleus | 18.77 | 34.39 |
| CDX91265 | Canola | cytosol, mitochondrion, nucleus | 10.74 | 33.21 |
| Bra036227.1-P | Field mustard | plastid | 28.52 | 32.72 |
| KRH71485 | Soybean | cytosol, endoplasmic reticulum, nucleus | 30.86 | 29.98 |
| AT1G03365.2 | Thale cress | nucleus | 29.14 | 28.68 |
| AT4G03000.2 | Thale cress | nucleus | 28.64 | 28.5 |
| CDX89896 | Canola | nucleus | 29.26 | 28.28 |
| GSMUA_Achr3P23730_001 | Banana | nucleus | 24.69 | 27.7 |
| GSMUA_Achr2P01510_001 | Banana | nucleus | 27.04 | 27.14 |
| GSMUA_Achr3P09160_001 | Banana | nucleus | 24.32 | 26.84 |
| CDY21932 | Canola | nucleus, plastid | 26.79 | 26.4 |
| PGSC0003DMT400081760 | Potato | plastid | 29.14 | 26.19 |
| CDY18168 | Canola | nucleus | 16.05 | 25.15 |
| PGSC0003DMT400052886 | Potato | nucleus | 21.48 | 24.07 |
| TraesCS1B01G101700.1 | Wheat | cytosol | 23.95 | 22.3 |
| HORVU1Hr1G018310.1 | Barley | cytosol | 23.95 | 22.27 |
| TraesCS1D01G085400.1 | Wheat | cytosol | 23.83 | 22.18 |
| EER99333 | Sorghum | nucleus, plastid | 23.21 | 22.17 |
| TraesCS1A01G084200.1 | Wheat | cytosol | 23.7 | 22.09 |
| Zm00001d006317_P002 | Maize | plastid | 23.21 | 21.96 |
| Os05t0141500-01 | Rice | nucleus, plastid | 22.96 | 21.43 |
| OQU88874 | Sorghum | nucleus | 16.42 | 16.84 |
| Zm00001d005154_P001 | Maize | nucleus | 15.8 | 16.26 |
| Zm00001d021404_P001 | Maize | cytosol | 22.47 | 16.09 |
| Os05t0141400-01 | Rice | plastid | 3.95 | 14.29 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009742 | EnsemblPlantsGene:PGSC0003DMG400003811 | EntrezGene:102605675 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF164 | PFAM:PF13920 |
| PFscan:PS50089 | PGSC:PGSC0003DMG400003811 | RefSeq:XP_006358439.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI000295026D |
| UniProt:M0ZWV5 | MapMan:35.1 | : | : | : | : |
Description
Nutrient reservoir [Source:PGSC_GENE;Acc:PGSC0003DMG400003811]
Coordinates
chr9:+:51330867..51334867
Molecular Weight (calculated)
91154.9 Da
IEP (calculated)
6.724
GRAVY (calculated)
-0.628
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDDNISDDA NKKSLVVSDK KIGSMNKRKL VSELPLGTLT DSPVSCLTEF PKYELLEEAP KENTIFEIDP LKGGCPQSDA EQEVEMPPDT DWEDTITTQL
101: LELLTQNLST VFQSAVKKIV KCGYSEEIAE WVIMRSGLYH GSKDAISNVV DGALALLSRE KVFDIDKPVV FEGLPSLVNY TLLEMICVLR EVKPALPVVE
201: ALWWLLILDL NPIHACTMEG YHLVELCSQE SLGDSSSGLN LPQSKIEASD NTQSNPDKQQ LSKPFTPIAQ TLQSKVPIAS ASPQEPESKN SNVCQAAKGK
301: GSSTPFPKAE AKSKGAVLED KSRGGKNSIN SKKDLRRRKT YQFEKKNCRS RTSKNIKANM TAWESLVLDK NVNLSFSGVT KKSSHSKGTT CIKCNQPLAK
401: ASSDSPCLSS FIAPASDTSK VPPMQDNVND KDMDSLAMEP KSSKKALDNT TISSAVPDYF VGIPYDESLG KYVPQNERDE TILLRTSRLK SLQKELQGWS
501: DWANEKVMQA TWRLGKDQAE LKMLRQEKKD AEKVHQEKEM PEKDTMERIM EMEQALVNTN SMSEITNSLL NTLEMDNVGL KKDMEALMLS TSKHAMNVNN
601: ALAKEQEAIK NCQAADMERH SFEEDLSTIK QEKTSLQQQQ EKANRVVDQF KVLLKQEERV KQRFLQQANS LKAKREQLRV HGKVQRDNFR EKVERNMQKY
701: KEDIQKCESE ISQLRFQSER SKIEALKRGI PQMTKGLAAY AERYGSNVLN VERECIMCMN EQISVVFLPC AHQVLCEDCN VLHQKKGMEK CPSCRTPIKE
801: RISVHFPDSE
101: LELLTQNLST VFQSAVKKIV KCGYSEEIAE WVIMRSGLYH GSKDAISNVV DGALALLSRE KVFDIDKPVV FEGLPSLVNY TLLEMICVLR EVKPALPVVE
201: ALWWLLILDL NPIHACTMEG YHLVELCSQE SLGDSSSGLN LPQSKIEASD NTQSNPDKQQ LSKPFTPIAQ TLQSKVPIAS ASPQEPESKN SNVCQAAKGK
301: GSSTPFPKAE AKSKGAVLED KSRGGKNSIN SKKDLRRRKT YQFEKKNCRS RTSKNIKANM TAWESLVLDK NVNLSFSGVT KKSSHSKGTT CIKCNQPLAK
401: ASSDSPCLSS FIAPASDTSK VPPMQDNVND KDMDSLAMEP KSSKKALDNT TISSAVPDYF VGIPYDESLG KYVPQNERDE TILLRTSRLK SLQKELQGWS
501: DWANEKVMQA TWRLGKDQAE LKMLRQEKKD AEKVHQEKEM PEKDTMERIM EMEQALVNTN SMSEITNSLL NTLEMDNVGL KKDMEALMLS TSKHAMNVNN
601: ALAKEQEAIK NCQAADMERH SFEEDLSTIK QEKTSLQQQQ EKANRVVDQF KVLLKQEERV KQRFLQQANS LKAKREQLRV HGKVQRDNFR EKVERNMQKY
701: KEDIQKCESE ISQLRFQSER SKIEALKRGI PQMTKGLAAY AERYGSNVLN VERECIMCMN EQISVVFLPC AHQVLCEDCN VLHQKKGMEK CPSCRTPIKE
801: RISVHFPDSE
001: MVEKQEEMNE FGAVNGGKVG TSSSVSPPQD KGRKNKRKLA DPSPQNAASL TEFPRYELHS FKSQSPLCEN DSNGQLKAEE SDSVGWDDPF ACHLEGLLSS
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG
Arabidopsis Description
RF298Putative E3 ubiquitin-protein ligase RF298 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPJ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.