Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22093 | Canola | nucleus | 48.3 | 89.82 |
| CDX91265 | Canola | cytosol, mitochondrion, nucleus | 24.94 | 78.24 |
| AT4G03000.2 | Thale cress | nucleus | 56.08 | 56.63 |
| Solyc09g074160.1.1 | Tomato | cytosol | 4.01 | 55.0 |
| Solyc10g050590.1.1 | Tomato | cytosol | 3.41 | 54.9 |
| Solyc08g016350.1.1 | Tomato | extracellular | 4.14 | 47.22 |
| CDX89896 | Canola | nucleus | 47.69 | 46.78 |
| PGSC0003DMT400009741 | Potato | nucleus | 6.08 | 43.86 |
| Solyc08g016370.1.1 | Tomato | cytosol, extracellular, plasma membrane | 5.84 | 40.0 |
| CDY18168 | Canola | nucleus | 23.84 | 37.91 |
| KRH71485 | Soybean | cytosol, endoplasmic reticulum, nucleus | 33.45 | 32.97 |
| Solyc10g050610.1.1 | Tomato | nucleus | 11.8 | 30.5 |
| GSMUA_Achr3P23730_001 | Banana | nucleus | 26.64 | 30.33 |
| Solyc06g008900.2.1 | Tomato | nucleus | 30.78 | 30.05 |
| Solyc09g074140.1.1 | Tomato | nucleus | 19.71 | 29.72 |
| Solyc09g074120.1.1 | Tomato | nucleus | 19.71 | 29.67 |
| GSMUA_Achr3P09160_001 | Banana | nucleus | 26.03 | 29.16 |
| GSMUA_Achr2P01510_001 | Banana | nucleus | 27.74 | 28.25 |
| PGSC0003DMT400074463 | Potato | cytosol | 14.72 | 27.63 |
| Solyc09g074200.1.1 | Tomato | nucleus | 26.89 | 27.39 |
| CDX84219 | Canola | mitochondrion, nucleus | 19.34 | 26.86 |
| PGSC0003DMT400009742 | Potato | nucleus | 26.4 | 26.79 |
| CDY31680 | Canola | mitochondrion, nucleus | 18.25 | 26.45 |
| Solyc09g074190.1.1 | Tomato | nucleus | 25.67 | 26.28 |
| Solyc09g074130.1.1 | Tomato | endoplasmic reticulum | 22.14 | 26.15 |
| Solyc09g074170.1.1 | Tomato | cytosol | 10.1 | 25.94 |
| EER99333 | Sorghum | nucleus, plastid | 25.91 | 25.12 |
| Solyc09g074150.1.1 | Tomato | nucleus | 12.41 | 25.06 |
| CDX93827 | Canola | cytosol | 20.56 | 24.6 |
| CDY01268 | Canola | cytosol | 20.56 | 24.6 |
| TraesCS1B01G101700.1 | Wheat | cytosol | 26.03 | 24.6 |
| Os05t0141500-01 | Rice | nucleus, plastid | 25.79 | 24.42 |
| TraesCS1A01G084200.1 | Wheat | cytosol | 25.79 | 24.4 |
| TraesCS1D01G085400.1 | Wheat | cytosol | 25.67 | 24.25 |
| HORVU1Hr1G018310.1 | Barley | cytosol | 25.67 | 24.23 |
| Zm00001d006317_P002 | Maize | plastid | 24.94 | 23.95 |
| OQU88874 | Sorghum | nucleus | 19.22 | 20.0 |
| Zm00001d021404_P001 | Maize | cytosol | 25.91 | 18.83 |
| Zm00001d005154_P001 | Maize | nucleus | 17.64 | 18.42 |
| Os05t0141400-01 | Rice | plastid | 4.62 | 16.96 |
Protein Annotations
| EnsemblPlants:CDY21932 | EnsemblPlantsGene:GSBRNA2T00018260001 | Gene3D:3.30.40.10 | GO:A0A078GA93 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF141 | PFAM:PF13920 |
| PFscan:PS50089 | ProteinID:CDY21932 | ProteinID:CDY21932.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0004EEA68D |
| UniProt:A0A078GA93 | MapMan:35.1 | : | : | : | : |
Description
BnaC09g00380DBnaC09g00380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA93]
Coordinates
chrLK032126:+:194725..198026
Molecular Weight (calculated)
92277.6 Da
IEP (calculated)
9.455
GRAVY (calculated)
-0.610
Length
822 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNQTIKHSF GSVQHNYVLT KLTDNRINRS NQTGSLLSIT FCTNPSSCRK DKKEAHDQFC SALPPCSRHA LPVFSSQYNL CLKKHFIHRS LSLINSPPII
101: FPRLSNPIPS QKAMNECVVA SLNGSNKVGV SPPPQPQGKG RKNKRKLADS PQPLTDSLTE FPPYELVHSL KFQTPLSEES ESLGWDDPFA CYLEELLTSN
201: LMALFRNAMD QIVACGYRED VVLKAISGSR LYCGGNDLVS NIVNDTLSFL KSGKKVSGLR DYLFEDLQQL VAYTLIEKIS LVKEVRPSVS TVEAMWRLLM
301: CDLNVFQAFE MEGDGIVECN PTKYSEPVVK FGNFKNCNGS SSEVAKRKTL ASSSSSVAAS SGEKLVSGRK GRTKKEVAMM RQKSCVDKIR TYSKGSGGYK
401: TAKYASVGGF LVEKRGKSPS KIAPEAVKDP PALDGSGYVT ALPAVNAPPA PLPSGSEPAL DYYTGIPYDA SLGIYVPRNK RDELVLKLAP RMKDLETELQ
501: VWTDWANQKV KQATSRLLKD QPELKALRKE KEEAEELRKE RQILEESNTK RRSEMEFALS NMTRQLEKAN NAVRRLEMEQ SLLRKEREAA NLRASEAAVN
601: YKEAKERVQK TLKSSQSWEG QKALLQEEVK SQRDKVAELQ QEVAKAKNRQ NQIEATWKQE KAAKEKLAAQ ATALHEERVK LEELGKAEEE RIKTKAENDV
701: RYYTENIKRL ESEISKLKLK SDCLKIAALK KGIDGSNDMT HTTTTTKASL IWENNHRTEG KIKRERECVM CLSEEMSVIF LPCAHQVLCS KCNQLHEKEA
801: MDDCPSCRAK IQRRIQARFA RG
101: FPRLSNPIPS QKAMNECVVA SLNGSNKVGV SPPPQPQGKG RKNKRKLADS PQPLTDSLTE FPPYELVHSL KFQTPLSEES ESLGWDDPFA CYLEELLTSN
201: LMALFRNAMD QIVACGYRED VVLKAISGSR LYCGGNDLVS NIVNDTLSFL KSGKKVSGLR DYLFEDLQQL VAYTLIEKIS LVKEVRPSVS TVEAMWRLLM
301: CDLNVFQAFE MEGDGIVECN PTKYSEPVVK FGNFKNCNGS SSEVAKRKTL ASSSSSVAAS SGEKLVSGRK GRTKKEVAMM RQKSCVDKIR TYSKGSGGYK
401: TAKYASVGGF LVEKRGKSPS KIAPEAVKDP PALDGSGYVT ALPAVNAPPA PLPSGSEPAL DYYTGIPYDA SLGIYVPRNK RDELVLKLAP RMKDLETELQ
501: VWTDWANQKV KQATSRLLKD QPELKALRKE KEEAEELRKE RQILEESNTK RRSEMEFALS NMTRQLEKAN NAVRRLEMEQ SLLRKEREAA NLRASEAAVN
601: YKEAKERVQK TLKSSQSWEG QKALLQEEVK SQRDKVAELQ QEVAKAKNRQ NQIEATWKQE KAAKEKLAAQ ATALHEERVK LEELGKAEEE RIKTKAENDV
701: RYYTENIKRL ESEISKLKLK SDCLKIAALK KGIDGSNDMT HTTTTTKASL IWENNHRTEG KIKRERECVM CLSEEMSVIF LPCAHQVLCS KCNQLHEKEA
801: MDDCPSCRAK IQRRIQARFA RG
001: MVEKQEEMNE FGAVNGGKVG TSSSVSPPQD KGRKNKRKLA DPSPQNAASL TEFPRYELHS FKSQSPLCEN DSNGQLKAEE SDSVGWDDPF ACHLEGLLSS
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG
Arabidopsis Description
RF298Putative E3 ubiquitin-protein ligase RF298 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPJ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.