Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 6
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc10g050590.1.1 | Tomato | cytosol | 3.12 | 13.73 |
Solyc08g016370.1.1 | Tomato | cytosol, extracellular, plasma membrane | 6.7 | 12.5 |
Solyc08g016350.1.1 | Tomato | extracellular | 3.57 | 11.11 |
Solyc09g074160.1.1 | Tomato | cytosol | 2.68 | 10.0 |
Solyc10g050610.1.1 | Tomato | nucleus | 10.71 | 7.55 |
Solyc09g074170.1.1 | Tomato | cytosol | 10.71 | 7.5 |
Bra036227.1-P | Field mustard | plastid | 16.96 | 5.38 |
PGSC0003DMT400009741 | Potato | nucleus | 2.68 | 5.26 |
CDY22093 | Canola | nucleus | 9.38 | 4.75 |
Os09t0371700-01 | Rice | nucleus | 4.46 | 4.69 |
KRH71485 | Soybean | cytosol, endoplasmic reticulum, nucleus | 17.41 | 4.68 |
CDY21932 | Canola | nucleus, plastid | 16.96 | 4.62 |
Solyc09g074120.1.1 | Tomato | nucleus | 11.16 | 4.58 |
Solyc09g074190.1.1 | Tomato | nucleus | 15.18 | 4.23 |
AT4G03000.2 | Thale cress | nucleus | 15.18 | 4.18 |
PGSC0003DMT400074463 | Potato | cytosol | 8.04 | 4.11 |
CDY18168 | Canola | nucleus | 9.38 | 4.06 |
Solyc06g008900.2.1 | Tomato | nucleus | 15.18 | 4.04 |
KRH02160 | Soybean | nucleus | 15.62 | 3.99 |
PGSC0003DMT400009742 | Potato | nucleus | 14.29 | 3.95 |
VIT_05s0020g02320.t01 | Wine grape | nucleus | 15.62 | 3.93 |
Solyc01g080430.2.1 | Tomato | nucleus | 14.73 | 3.85 |
KRH20958 | Soybean | nucleus, plastid | 15.18 | 3.85 |
Solyc09g074130.1.1 | Tomato | endoplasmic reticulum | 11.61 | 3.74 |
Solyc09g074200.1.1 | Tomato | nucleus | 13.39 | 3.72 |
KRH50955 | Soybean | nucleus | 14.73 | 3.71 |
AT1G03365.2 | Thale cress | nucleus | 13.39 | 3.65 |
KRH11313 | Soybean | nucleus, plastid | 14.29 | 3.62 |
CDX89896 | Canola | nucleus | 13.39 | 3.58 |
PGSC0003DMT400081760 | Potato | plastid | 14.29 | 3.55 |
Bra033393.1-P | Field mustard | nucleus | 4.02 | 3.35 |
Solyc09g074140.1.1 | Tomato | nucleus | 8.04 | 3.3 |
Zm00001d005154_P001 | Maize | nucleus | 11.16 | 3.18 |
Os05t0141500-01 | Rice | nucleus, plastid | 12.05 | 3.11 |
CDX91265 | Canola | cytosol, mitochondrion, nucleus | 3.57 | 3.05 |
OQU88874 | Sorghum | nucleus | 10.71 | 3.04 |
Solyc09g074150.1.1 | Tomato | nucleus | 5.36 | 2.95 |
Protein Annotations
Gene3D:3.40.1280.10 | MapMan:35.2 | EntrezGene:4337763 | ProteinID:AAS90642.1 | EMBL:AK071339 | EMBL:AK106875 |
InterPro:Alpha/beta_knot_MTases | ProteinID:BAF16518.1 | ProteinID:BAS92201.1 | ProteinID:EEE62280.1 | GO:GO:0001510 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006396 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008173 | GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR029026 |
EnsemblPlantsGene:Os05g0141400 | EnsemblPlants:Os05t0141400-01 | PFAM:PF00588 | PANTHER:PTHR43191 | PANTHER:PTHR43191:SF1 | UniProt:Q75KG9 |
SUPFAM:SSF75217 | InterPro:SpoU_MeTrfase | UniParc:UPI00003589B8 | RefSeq:XP_015639706.1 | SEG:seg | InterPro:tRNA_m1G_MTases_N |
Description
tRNA/rRNA methyltransferase, SpoU domain containing protein. (Os05t0141400-01)
Coordinates
chr5:-:2378791..2381834
Molecular Weight (calculated)
24225.6 Da
IEP (calculated)
6.846
GRAVY (calculated)
-0.100
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAAAVE SVVVVHNVAK RHNVGTLARS ATAFGVAEVV VVGRRDVSAF GSHGATSHLR FRHFASLPLA RAYLKDERGC DICGVEITHN ALPVTAHPFR
101: RSTAFLFGNE GTGLSQKECE ICDFFVYIPQ YGGGTASLNV TVAASIVLHH FGVWAGFPER GREGNKFVVA DKPKGQSRGL YCTDSIEEVI EERKMRRENA
201: CDIFEENGSS EHQESNVLGT MLSD
101: RSTAFLFGNE GTGLSQKECE ICDFFVYIPQ YGGGTASLNV TVAASIVLHH FGVWAGFPER GREGNKFVVA DKPKGQSRGL YCTDSIEEVI EERKMRRENA
201: CDIFEENGSS EHQESNVLGT MLSD
001: MAGFESYVVV HNIAKRHNVG TLARSATAFG VTELILVGRR DFNAFGSHGS ASHIRFRHFH SLIEARNYLK EEKDCDICGV EIADGASAVN EHPFKRNTAF
101: LLGNEGSGLS AKEYEICDFF VYIPQYGCGT ASLNVTVAAS IVLHHFGVWA GFSERVRDGS KFIVADRPVR QGRRNFCAGT EESVIEERKL RKESAENGFF
201: DDNGNENGSS SSDLLDGLFL NE
101: LLGNEGSGLS AKEYEICDFF VYIPQYGCGT ASLNVTVAAS IVLHHFGVWA GFSERVRDGS KFIVADRPVR QGRRNFCAGT EESVIEERKL RKESAENGFF
201: DDNGNENGSS SSDLLDGLFL NE
Arabidopsis Description
OBP33pep like protein [Source:UniProtKB/TrEMBL;Acc:Q8GYT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.