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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 6
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g050590.1.1 Tomato cytosol 3.12 13.73
Solyc08g016370.1.1 Tomato cytosol, extracellular, plasma membrane 6.7 12.5
Solyc08g016350.1.1 Tomato extracellular 3.57 11.11
Solyc09g074160.1.1 Tomato cytosol 2.68 10.0
Solyc10g050610.1.1 Tomato nucleus 10.71 7.55
Solyc09g074170.1.1 Tomato cytosol 10.71 7.5
Bra036227.1-P Field mustard plastid 16.96 5.38
PGSC0003DMT400009741 Potato nucleus 2.68 5.26
CDY22093 Canola nucleus 9.38 4.75
Os09t0371700-01 Rice nucleus 4.46 4.69
KRH71485 Soybean cytosol, endoplasmic reticulum, nucleus 17.41 4.68
CDY21932 Canola nucleus, plastid 16.96 4.62
Solyc09g074120.1.1 Tomato nucleus 11.16 4.58
Solyc09g074190.1.1 Tomato nucleus 15.18 4.23
AT4G03000.2 Thale cress nucleus 15.18 4.18
PGSC0003DMT400074463 Potato cytosol 8.04 4.11
CDY18168 Canola nucleus 9.38 4.06
Solyc06g008900.2.1 Tomato nucleus 15.18 4.04
KRH02160 Soybean nucleus 15.62 3.99
PGSC0003DMT400009742 Potato nucleus 14.29 3.95
VIT_05s0020g02320.t01 Wine grape nucleus 15.62 3.93
Solyc01g080430.2.1 Tomato nucleus 14.73 3.85
KRH20958 Soybean nucleus, plastid 15.18 3.85
Solyc09g074130.1.1 Tomato endoplasmic reticulum 11.61 3.74
Solyc09g074200.1.1 Tomato nucleus 13.39 3.72
KRH50955 Soybean nucleus 14.73 3.71
AT1G03365.2 Thale cress nucleus 13.39 3.65
KRH11313 Soybean nucleus, plastid 14.29 3.62
CDX89896 Canola nucleus 13.39 3.58
PGSC0003DMT400081760 Potato plastid 14.29 3.55
Bra033393.1-P Field mustard nucleus 4.02 3.35
Solyc09g074140.1.1 Tomato nucleus 8.04 3.3
Zm00001d005154_P001 Maize nucleus 11.16 3.18
Os05t0141500-01 Rice nucleus, plastid 12.05 3.11
CDX91265 Canola cytosol, mitochondrion, nucleus 3.57 3.05
OQU88874 Sorghum nucleus 10.71 3.04
Solyc09g074150.1.1 Tomato nucleus 5.36 2.95
Protein Annotations
Gene3D:3.40.1280.10MapMan:35.2EntrezGene:4337763ProteinID:AAS90642.1EMBL:AK071339EMBL:AK106875
InterPro:Alpha/beta_knot_MTasesProteinID:BAF16518.1ProteinID:BAS92201.1ProteinID:EEE62280.1GO:GO:0001510GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0005488GO:GO:0006139GO:GO:0006396
GO:GO:0008150GO:GO:0008152GO:GO:0008173GO:GO:0009987GO:GO:0016740InterPro:IPR029026
EnsemblPlantsGene:Os05g0141400EnsemblPlants:Os05t0141400-01PFAM:PF00588PANTHER:PTHR43191PANTHER:PTHR43191:SF1UniProt:Q75KG9
SUPFAM:SSF75217InterPro:SpoU_MeTrfaseUniParc:UPI00003589B8RefSeq:XP_015639706.1SEG:segInterPro:tRNA_m1G_MTases_N
Description
tRNA/rRNA methyltransferase, SpoU domain containing protein. (Os05t0141400-01)
Coordinates
chr5:-:2378791..2381834
Molecular Weight (calculated)
24225.6 Da
IEP (calculated)
6.846
GRAVY (calculated)
-0.100
Length
224 amino acids
Sequence
(BLAST)
001: MAAAAAAAVE SVVVVHNVAK RHNVGTLARS ATAFGVAEVV VVGRRDVSAF GSHGATSHLR FRHFASLPLA RAYLKDERGC DICGVEITHN ALPVTAHPFR
101: RSTAFLFGNE GTGLSQKECE ICDFFVYIPQ YGGGTASLNV TVAASIVLHH FGVWAGFPER GREGNKFVVA DKPKGQSRGL YCTDSIEEVI EERKMRRENA
201: CDIFEENGSS EHQESNVLGT MLSD
Best Arabidopsis Sequence Match ( AT4G15520.1 )
(BLAST)
001: MAGFESYVVV HNIAKRHNVG TLARSATAFG VTELILVGRR DFNAFGSHGS ASHIRFRHFH SLIEARNYLK EEKDCDICGV EIADGASAVN EHPFKRNTAF
101: LLGNEGSGLS AKEYEICDFF VYIPQYGCGT ASLNVTVAAS IVLHHFGVWA GFSERVRDGS KFIVADRPVR QGRRNFCAGT EESVIEERKL RKESAENGFF
201: DDNGNENGSS SSDLLDGLFL NE
Arabidopsis Description
OBP33pep like protein [Source:UniProtKB/TrEMBL;Acc:Q8GYT1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.