Factsheet for Solyc09g074170.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g016370.1.1	Tomato	cytosol, extracellular, plasma membrane	13.75	36.67
Solyc10g050610.1.1	Tomato	nucleus	27.5	27.67
Solyc09g074140.1.1	Tomato	nucleus	33.12	19.45
Solyc09g074190.1.1	Tomato	nucleus	40.0	15.94
Solyc09g074200.1.1	Tomato	nucleus	39.69	15.74
Solyc09g074120.1.1	Tomato	nucleus	26.25	15.38
CDY18168	Canola	nucleus	22.81	14.12
Solyc06g008900.2.1	Tomato	nucleus	35.0	13.3
Solyc09g074150.1.1	Tomato	nucleus	16.88	13.27
Bra036227.1-P	Field mustard	plastid	26.56	12.04
Solyc08g016350.1.1	Tomato	extracellular	2.5	11.11
Solyc09g074130.1.1	Tomato	endoplasmic reticulum	23.44	10.78
Os05t0141400-01	Rice	plastid	7.5	10.71
CDY21932	Canola	nucleus, plastid	25.94	10.1
AT4G03000.2	Thale cress	nucleus	25.62	10.07
Solyc10g050590.1.1	Tomato	cytosol	1.56	9.8
CDX89896	Canola	nucleus	25.62	9.79
AT1G03365.2	Thale cress	nucleus	23.75	9.23
GSMUA_Achr3P09160_001	Banana	nucleus	20.94	9.13
CDY22093	Canola	nucleus	12.5	9.05
GSMUA_Achr3P23730_001	Banana	nucleus	20.31	9.0
Solyc08g006980.2.1	Tomato	nucleus	19.06	8.43
KRH71485	Soybean	cytosol, endoplasmic reticulum, nucleus	21.88	8.39
Solyc09g074160.1.1	Tomato	cytosol	1.56	8.33
GSMUA_Achr2P01510_001	Banana	nucleus	20.62	8.18
Solyc01g080430.2.1	Tomato	nucleus	21.56	8.05
EER99333	Sorghum	nucleus, plastid	17.81	6.72
Zm00001d006317_P002	Maize	plastid	17.81	6.66
Os05t0141500-01	Rice	nucleus, plastid	17.19	6.34
TraesCS1A01G084200.1	Wheat	cytosol	16.56	6.1
TraesCS1B01G101700.1	Wheat	cytosol	16.56	6.09
HORVU1Hr1G018310.1	Barley	cytosol	16.56	6.08
TraesCS1D01G085400.1	Wheat	cytosol	16.25	5.98
OQU88874	Sorghum	nucleus	14.69	5.95
Zm00001d005154_P001	Maize	nucleus	14.38	5.84
Zm00001d021404_P001	Maize	cytosol	16.56	4.69
Solyc08g077100.2.1	Tomato	nucleus	5.94	4.49
PGSC0003DMT400009741	Potato	nucleus	1.56	4.39
Bra033393.1-P	Field mustard	nucleus	2.5	2.97
CDX91265	Canola	cytosol, mitochondrion, nucleus	1.56	1.91

Protein Annotations

MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009966	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
UniProt:K4CUZ4	PANTHER:PTHR10044	PANTHER:PTHR10044:SF164	EnsemblPlantsGene:Solyc09g074170.1	EnsemblPlants:Solyc09g074170.1.1	UniParc:UPI000276B377

Description

No Description!

Coordinates

chr9:+:65900537..65902349

Molecular Weight (calculated)

35699.6 Da

IEP (calculated)

9.713

GRAVY (calculated)

-0.174

Length

320 amino acids

Sequence
(BLAST)

001: MVDDNISDHA DEESLVISDR EKGRRNKRIA VKRIVNCGYS EEIAKTFILK SGLYHGSKDV VSNIVDGALA LLSRKKVLNI GRPVVFADLP SLVDYTLMEM
101: FAKNCRSRTG KNIKANMIAM GSLFLAKKLD SSSSGATKKS LQSKVKILVK CNQPLAKESF DSPCLSSPIA PARDTSKVPP IQDNINEKDL DSLSMEPKSS
201: KKVLDSTTIS SAVQDYYVGI PYDESLGKYV PQNKRDEIIL LLTSHLKTMQ KQLQGWSDWV ERECVMCMHG HILVVFLPLH IKSFVKIAMC FAKRKEWMNA
301: ILVGHQLRSG LMSTFLISNS

Best Arabidopsis Sequence Match ( AT4G03000.4 )
(BLAST)

001: MVEKQEEMNE FGAVNGGKVG TSSSVSPPQD KGRKNKRKLA DPSPQNAASL TEFPRYELHS FKSQSPLCEN DSNGQLKAEE SDSVGWDDPF ACHLEGLLSS
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEVII SFLRN

Arabidopsis Description

RF298Putative E3 ubiquitin-protein ligase RF298 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPJ7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.