Factsheet for Solyc09g074150.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g074140.1.1	Tomato	nucleus	60.44	45.14
Solyc09g074120.1.1	Tomato	nucleus	51.6	38.46
Solyc10g050610.1.1	Tomato	nucleus	24.32	31.13
Solyc09g074130.1.1	Tomato	endoplasmic reticulum	52.83	30.89
Solyc09g074190.1.1	Tomato	nucleus	51.6	26.15
Solyc09g074200.1.1	Tomato	nucleus	50.86	25.65
CDY22093	Canola	nucleus	23.34	21.49
PGSC0003DMT400009741	Potato	nucleus	5.9	21.05
Solyc06g008900.2.1	Tomato	nucleus	41.28	19.95
Bra033393.1-P	Field mustard	nucleus	12.53	18.96
Solyc09g074170.1.1	Tomato	cytosol	13.27	16.88
Bra036227.1-P	Field mustard	plastid	28.5	16.43
CDX91265	Canola	cytosol, mitochondrion, nucleus	10.57	16.41
GSMUA_Achr3P09160_001	Banana	nucleus	28.26	15.67
KRH71485	Soybean	cytosol, endoplasmic reticulum, nucleus	30.71	14.99
GSMUA_Achr3P23730_001	Banana	nucleus	25.55	14.4
AT4G03000.2	Thale cress	nucleus	27.52	13.76
AT1G03365.2	Thale cress	nucleus	26.78	13.24
GSMUA_Achr2P01510_001	Banana	nucleus	26.04	13.14
CDX89896	Canola	nucleus	27.03	13.13
Solyc08g077100.2.1	Tomato	nucleus	13.27	12.77
CDY21932	Canola	nucleus, plastid	25.06	12.41
Solyc08g006980.2.1	Tomato	nucleus	21.62	12.15
Solyc01g080430.2.1	Tomato	nucleus	25.55	12.14
HORVU1Hr1G018310.1	Barley	cytosol	23.59	11.02
EER99333	Sorghum	nucleus, plastid	22.85	10.97
TraesCS1B01G101700.1	Wheat	cytosol	22.85	10.69
TraesCS1A01G084200.1	Wheat	cytosol	22.6	10.59
Zm00001d006317_P002	Maize	plastid	22.11	10.51
Os05t0141500-01	Rice	nucleus, plastid	22.36	10.48
TraesCS1D01G085400.1	Wheat	cytosol	22.11	10.34
CDY18168	Canola	nucleus	12.53	9.86
Zm00001d021404_P001	Maize	cytosol	21.87	7.87
OQU88874	Sorghum	nucleus	14.25	7.34
Zm00001d005154_P001	Maize	nucleus	12.78	6.61
Solyc10g050590.1.1	Tomato	cytosol	0.74	5.88
Solyc08g016370.1.1	Tomato	cytosol, extracellular, plasma membrane	1.72	5.83
Os05t0141400-01	Rice	plastid	2.95	5.36
Solyc09g074160.1.1	Tomato	cytosol	0.74	5.0
Solyc08g016350.1.1	Tomato	extracellular	0.49	2.78

Protein Annotations

MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009966	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	UniProt:K4CUZ2	PANTHER:PTHR10044	PANTHER:PTHR10044:SF164	EnsemblPlantsGene:Solyc09g074150.1	EnsemblPlants:Solyc09g074150.1.1
UniParc:UPI000276B375	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:65891829..65893462

Molecular Weight (calculated)

46490.8 Da

IEP (calculated)

6.013

GRAVY (calculated)

-0.950

Length

407 amino acids

Sequence
(BLAST)

001: MVDDNISDDA DEKSLAISDR EKGSRNKRKF ESKIPLGTSS NSHRSSLTEF LRYDLLEKRT KGVTLFKIDP LTSGCPQYDA EQEVGTAPNI DSEDMSACCS
101: FVLDKKLDSS SSGETKKSSH SKMKILVKCN QPLAKESFNN QCLSSPIAPA SDTSKVPPIK DNINEKDLDS LSLEPKSSKK VPEHNYFFCG TPQEELQEWS
201: DWANEKVMQA TWSLGKDQAE LKRMRQEKED AENVHQEKHM LEETTMRRIM EMEQALVNTS SMGETIYSLL NTLDMDNVGL KKDLEAVMLS TGKHAMNVNN
301: ALAKEQEALK KCQAADTEKR SFEEDLSDLL KQEESVKQRF QQQADCLKNE REQLRVKGKV QRHKFREKVE RNKQKYKEEI QKCESEISQL RFQSERSITE
401: ALKRGIP

Best Arabidopsis Sequence Match ( AT4G03000.1 )
(BLAST)

001: MVEKQEEMNE FGAVNGGKVG TSSSVSPPQD KGRKNKRKLA DPSPQNAASL TEFPRYELHS FKSQSPLCEN DSNGQLKAEE SDSVGWDDPF ACHLEGLLSS
101: NLLTLFRSAM NQIMDCGYSE DVVLKAISSS RFYCGGTDLV SNIVNDTLSF LKSGKKVAGS RDYVFEDLQQ LVAYSLVEKI SLVREVRPSL STDEAMWRLL
201: ICDLNVLKAF EVDADGLEGS SVSNASKSSE SPVAECNPPK SSDADNPKAP VSNTQSKQSE PVKFGNFANV NNSKNPHASG ATPGKEVFSV STASGEGTKS
301: ASLTSVSDEK LVSCRKGRTK KEMAMLRQKS CVEKIRTYSK GGGYKTAKFG GFLVEKRGKS ASDLLSAQAR NSSSKITTEV MKIPLAESSS TLSNSTKSDS
401: PALDVKEHVT ALPANNAPAP VASEKKSGSE PEEKPSVSTK PAPDYYAAIP YDATLGIYIP RNKRDELILK LVPRMKDLQK ELQDWTDWAN QKVKQATVRL
501: LKDQPELKAL RKEKEEAEEF RKEKQLLEEN TIKRRSEMEL ALNNATNQLE RTNNTIRRLE LEQSLLKRER EAANIRASES AESCREAKER VQRLLKNSQS
601: WEGQKNLLQE ELKSQRDKVA GLQQEVAKAK TRQNQIEATW KQEKSATGKL TAQAAALKKE RGKLEELGKA EEERIKTKAE NDVKYYIENI KRLDTEISKL
701: KLKSDSLKIA ALKKGIDGNN DGNKSGMNHT TNTKANSMAS AKVWENNQGA ESKIKREREC VMCLSEEMSV IFLPCAHQVL CSKCNQLHEK EAMEDCPSCR
801: AKIQRRIQAR FARG

Arabidopsis Description

RF298Putative E3 ubiquitin-protein ligase RF298 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPJ7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.