Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04472 | Canola | cytosol | 94.53 | 94.53 |
| CDX71478 | Canola | cytosol | 93.85 | 93.85 |
| CDY38538 | Canola | cytosol | 93.62 | 93.62 |
| CDX83249 | Canola | cytosol | 93.39 | 93.61 |
| Bra000529.1-P | Field mustard | cytosol | 93.39 | 93.39 |
| GSMUA_Achr6P23660_001 | Banana | cytosol | 84.97 | 86.14 |
| KRH64921 | Soybean | nucleus | 85.42 | 85.42 |
| Solyc11g062430.1.1 | Tomato | cytosol | 85.42 | 85.42 |
| VIT_08s0040g00430.t01 | Wine grape | cytosol | 85.42 | 85.23 |
| PGSC0003DMT400082384 | Potato | cytosol | 84.74 | 84.74 |
| KRH57710 | Soybean | nucleus | 84.28 | 84.28 |
| KRG94272 | Soybean | nucleus | 83.6 | 83.6 |
| Solyc01g008840.2.1 | Tomato | cytosol | 83.6 | 83.6 |
| Os01t0279200-02 | Rice | plasma membrane | 82.92 | 82.92 |
| KRG94968 | Soybean | cytosol | 84.97 | 82.89 |
| HORVU3Hr1G039980.8 | Barley | nucleus | 82.69 | 82.69 |
| TraesCS3D01G194400.1 | Wheat | nucleus | 82.69 | 82.69 |
| TraesCS3A01G191800.1 | Wheat | golgi, unclear | 82.69 | 82.69 |
| PGSC0003DMT400072227 | Potato | nucleus | 82.69 | 82.69 |
| TraesCS3B01G219800.1 | Wheat | cytosol | 82.46 | 82.46 |
| Solyc10g081150.1.1 | Tomato | nucleus | 82.23 | 82.23 |
| EES02774 | Sorghum | cytosol | 82.23 | 82.23 |
| Zm00001d040462_P001 | Maize | cytosol, nucleus, peroxisome | 82.0 | 80.0 |
| Zm00001d008233_P001 | Maize | cytosol, nucleus, peroxisome | 82.0 | 77.59 |
| PGSC0003DMT400058484 | Potato | cytosol | 83.37 | 76.57 |
| Bra012038.1-P | Field mustard | nucleus | 92.26 | 47.42 |
| AT1G29150.1 | Thale cress | cytosol, nucleus, plastid | 17.77 | 18.62 |
Protein Annotations
| Gene3D:1.25.40.570 | MapMan:19.2.3.3.1.2 | EntrezGene:817241 | UniProt:A0A178VSH3 | ProteinID:AAC77857.2 | ProteinID:AEC07920.1 |
| EMBL:AF395058 | ArrayExpress:AT2G26990 | EnsemblPlantsGene:AT2G26990 | RefSeq:AT2G26990 | TAIR:AT2G26990 | RefSeq:AT2G26990-TAIR-G |
| EnsemblPlants:AT2G26990.1 | TAIR:AT2G26990.1 | EMBL:AY050437 | EMBL:AY087622 | EMBL:AY133536 | Unigene:At.13162 |
| Symbol:FUS12 | GO:GO:0000338 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006139 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008180 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009585 | GO:GO:0009605 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010017 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0045892 |
| InterPro:IPR000717 | RefSeq:NP_565632.1 | ProteinID:OAP07792.1 | InterPro:PCI_dom | PFAM:PF01399 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50250 | PANTHER:PTHR10678 | PANTHER:PTHR10678:SF3 | UniProt:Q8W207 | SMART:SM00088 |
| SMART:SM00753 | SUPFAM:SSF46785 | UniParc:UPI00000A6F38 | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
CSN2COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W207]
Coordinates
chr2:-:11519388..11522616
Molecular Weight (calculated)
51189.3 Da
IEP (calculated)
5.235
GRAVY (calculated)
-0.612
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDADMEDY GFEYSDEEQE EQDVDIENQY YNSKGMVETE PEEALSGFAE VVQMEPEKAD WGFKALKQTV KIYYRLGKYK EMMEAYTEML TYIKSAVTRN
101: YSEKCINNIM DFVSGSASQN TGLLQEFYQT TLKALEEAKN ERLWFKTNLK LCNIWFDIGE YRRMTKILKE LHKSCQKEDG TDDQKKGSQL LEVYAIEIQI
201: YTETKDNKKL KQLYHKALAI KSAIPHPRIM GIIRECGGKM HMAERQWEEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN
301: DPEILAMTNL IAAYQRNEII EFERILKSNR RTIMDDPFIR NYMEDLLKKV RTQVLLKLIK PYTKIGIPFI SKELNVPETD VTELLVSLIL DSRIDGHIDE
401: MNRYLLRGDS GNGRKLHKAV DKWNSQLKSL SSNITSRVC
101: YSEKCINNIM DFVSGSASQN TGLLQEFYQT TLKALEEAKN ERLWFKTNLK LCNIWFDIGE YRRMTKILKE LHKSCQKEDG TDDQKKGSQL LEVYAIEIQI
201: YTETKDNKKL KQLYHKALAI KSAIPHPRIM GIIRECGGKM HMAERQWEEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN
301: DPEILAMTNL IAAYQRNEII EFERILKSNR RTIMDDPFIR NYMEDLLKKV RTQVLLKLIK PYTKIGIPFI SKELNVPETD VTELLVSLIL DSRIDGHIDE
401: MNRYLLRGDS GNGRKLHKAV DKWNSQLKSL SSNITSRVC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.