Factsheet for Bra012957.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02145	Canola	nucleus	100.0	100.0
Bra029314.1-P	Field mustard	nucleus	65.4	73.8
Solyc06g035570.1.1	Tomato	nucleus	18.01	70.37
Bra013891.1-P	Field mustard	nucleus	59.72	66.67
VIT_16s0022g02400.t01	Wine grape	nucleus	23.7	63.29
Bra028282.1-P	Field mustard	nucleus	55.45	57.92
Bra029155.1-P	Field mustard	nucleus	54.5	55.02
Bra010465.1-P	Field mustard	nucleus	48.34	54.55
Bra028283.1-P	Field mustard	nucleus	48.34	51.26
Bra029154.1-P	Field mustard	nucleus	53.08	51.14
Bra029281.1-P	Field mustard	nucleus	49.29	49.76
Bra020826.1-P	Field mustard	nucleus	33.18	47.95
PGSC0003DMT400065060	Potato	nucleus	25.12	47.75
Os03t0834466-00	Rice	nucleus	14.22	46.15
Bra029424.1-P	Field mustard	nucleus	36.97	45.09
Bra039324.1-P	Field mustard	nucleus	44.55	44.13
Bra004928.1-P	Field mustard	nucleus	44.55	44.13
PGSC0003DMT400062319	Potato	nucleus	24.64	43.7
Bra000393.1-P	Field mustard	nucleus	43.6	43.19
KRG91427	Soybean	nucleus	43.6	42.99
GSMUA_Achr10P...	Banana	nucleus	40.76	42.57
KRH35396	Soybean	nucleus	43.13	42.52
GSMUA_Achr11P...	Banana	nucleus	41.71	42.31
GSMUA_Achr2P04340_001	Banana	nucleus	42.65	42.25
Solyc03g006830.2.1	Tomato	nucleus	44.08	41.89
Bra019343.1-P	Field mustard	nucleus	41.71	40.18
Os01t0903800-00	Rice	cytosol, nucleus	13.27	39.44
Bra035907.1-P	Field mustard	nucleus	46.92	36.4

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra012957	EnsemblPlants:Bra012957.1	EnsemblPlants:Bra012957.1-P	GO:GO:0000977
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4D8Z7	InterPro:MADS_MEF2-like
PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945
PANTHER:PTHR11945:SF341	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf
UniParc:UPI0002540576	SEG:seg	:	:	:	:

Description

AT5G51870 (E=7e-053) AGL71 | AGL71 (AGAMOUS-LIKE 71); transcription factor

Coordinates

chrA03:+:21333700..21336471

Molecular Weight (calculated)

24137.2 Da

IEP (calculated)

7.455

GRAVY (calculated)

-0.439

Length

211 amino acids

Sequence
(BLAST)

001: MVRGKIEIKR IENQTSRQIT FSKRRKGLLK KALELSVLCD AQVAAIVFSQ KGKIYEFASS DMKKMMEQCE IYRSGYFHAE RLQEERDVQD LKNEVTVMVN
101: RIELLQLHCR KLMGQDLGSC SVDELNEITI QIEKSLTLIR SRKAKVHEEE VGKLKAEIAG TRELVNERAT LHEMSGSLES ENNALSSSAF ENMNISDVET
201: DLFIGLPRRQ V

Best Arabidopsis Sequence Match ( AT5G51870.1 )
(BLAST)

001: MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ SGRLHEYSSS QMEKIIDRYG KFSNAFYVAE RPQVERYLQE LKMEIDRMVK
101: KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EVNMHHSSKG NTEGGHRTKH SSEVETDLFI
201: GLPVTRL

Arabidopsis Description

AGL71AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.