Factsheet for Bra028283.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00505	Canola	nucleus	93.97	85.78
CDY51029	Canola	nucleus	72.86	80.11
Solyc06g035570.1.1	Tomato	nucleus	20.1	74.07
Bra029154.1-P	Field mustard	nucleus	76.88	69.86
AT5G51870.3	Thale cress	nucleus	74.37	64.63
VIT_16s0022g02400.t01	Wine grape	nucleus	25.63	64.56
Bra029314.1-P	Field mustard	nucleus	54.27	57.75
Bra028282.1-P	Field mustard	nucleus	57.29	56.44
Bra013891.1-P	Field mustard	nucleus	51.76	54.5
Bra029155.1-P	Field mustard	nucleus	55.28	52.63
Os03t0834466-00	Rice	nucleus	16.58	50.77
Bra012957.1-P	Field mustard	nucleus	51.26	48.34
PGSC0003DMT400065060	Potato	nucleus	26.63	47.75
Bra029281.1-P	Field mustard	nucleus	49.75	47.37
Bra020826.1-P	Field mustard	nucleus	34.67	47.26
Bra010465.1-P	Field mustard	nucleus	44.22	47.06
PGSC0003DMT400062319	Potato	nucleus	27.64	46.22
Os01t0903800-00	Rice	cytosol, nucleus	15.58	43.66
GSMUA_Achr11P...	Banana	nucleus	45.23	43.27
Bra039324.1-P	Field mustard	nucleus	45.73	42.72
Bra004928.1-P	Field mustard	nucleus	45.73	42.72
GSMUA_Achr10P...	Banana	nucleus	43.22	42.57
Solyc03g006830.2.1	Tomato	nucleus	47.24	42.34
Bra000393.1-P	Field mustard	nucleus	44.72	41.78
Bra029424.1-P	Field mustard	nucleus	36.18	41.62
KRG91427	Soybean	nucleus	44.72	41.59
KRH35396	Soybean	nucleus	44.22	41.12
GSMUA_Achr2P04340_001	Banana	nucleus	42.21	39.44
Bra019343.1-P	Field mustard	nucleus	43.22	39.27
Bra035907.1-P	Field mustard	nucleus	46.73	34.19

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra028283	EnsemblPlants:Bra028283.1	EnsemblPlants:Bra028283.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4EHL8
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	PFscan:PS50066	PFscan:PS51297
PANTHER:PTHR11945	PANTHER:PTHR11945:SF341	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	UniParc:UPI0002543BA6	SEG:seg	:	:	:

Description

AT5G51870 (E=9e-068) AGL71 | AGL71 (AGAMOUS-LIKE 71); transcription factor

Coordinates

chrA01:+:18955439..18959972

Molecular Weight (calculated)

23051.1 Da

IEP (calculated)

8.665

GRAVY (calculated)

-0.493

Length

199 amino acids

Sequence
(BLAST)

001: MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ NGRLYEFSSS EMEKTIERYG DFSNEYFVLG RPQVQPYLEE LKKEMDIMVK
101: NIDLLEVQQR KLMGQGLGSC SVAELQEIDI QIEKSLRIEI KVLDERRRLR EKEIRERLLR PLLPVTLHTE KGEPEGGYRT KHSSEVETDL FIGLPVARP

Best Arabidopsis Sequence Match ( AT5G51870.4 )
(BLAST)

001: MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ SGRLHEYSSS QMEKIIDRYG KFSNAFYVAE RPQVERYLQE LKMEIDRMVK
101: KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD KGNTEGGHRT
201: KHSSEVETDL FIGLPVTRL

Arabidopsis Description

AGL71AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.