Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00505 | Canola | nucleus | 87.85 | 72.94 |
| Bra028283.1-P | Field mustard | nucleus | 80.11 | 72.86 |
| CDY38882 | Canola | nucleus | 76.24 | 63.01 |
| CDY32613 | Canola | nucleus | 76.24 | 63.01 |
| AT5G51870.3 | Thale cress | nucleus | 70.17 | 55.46 |
| CDY68754 | Canola | nucleus | 49.17 | 46.35 |
| CDY38881 | Canola | nucleus | 49.72 | 44.12 |
| CDY66015 | Canola | nucleus | 49.72 | 41.1 |
| CDY52354 | Canola | nucleus | 49.72 | 41.1 |
| CDY55721 | Canola | nucleus | 48.07 | 39.55 |
| CDY42874 | Canola | nucleus | 49.72 | 39.47 |
| CDX94444 | Canola | nucleus | 47.51 | 39.27 |
| CDY30701 | Canola | nucleus | 44.2 | 38.28 |
| CDY02145 | Canola | nucleus | 43.65 | 37.44 |
| CDY56935 | Canola | nucleus | 41.99 | 37.25 |
| CDY51028 | Canola | nucleus | 47.51 | 37.23 |
| CDY16792 | Canola | nucleus | 38.67 | 36.27 |
| CDY27368 | Canola | nucleus | 40.33 | 34.27 |
| CDY37054 | Canola | nucleus | 39.78 | 33.8 |
| CDY69077 | Canola | nucleus | 39.23 | 33.33 |
| CDX74755 | Canola | nucleus | 39.23 | 33.33 |
| GSMUA_Achr10P... | Banana | nucleus | 37.02 | 33.17 |
| Solyc03g006830.2.1 | Tomato | nucleus | 40.33 | 32.88 |
| CDY53886 | Canola | nucleus | 38.67 | 32.86 |
| CDY60689 | Canola | nucleus | 38.67 | 32.86 |
| CDY00504 | Canola | nucleus | 11.05 | 32.79 |
| GSMUA_Achr11P... | Banana | nucleus | 37.02 | 32.21 |
| KRG91427 | Soybean | nucleus | 37.57 | 31.78 |
| KRH35396 | Soybean | nucleus | 37.02 | 31.31 |
| CDY68007 | Canola | nucleus | 25.41 | 30.67 |
| CDY32614 | Canola | nucleus | 18.23 | 29.73 |
| CDY41269 | Canola | nucleus | 27.62 | 29.41 |
| CDX98780 | Canola | nucleus | 35.36 | 29.22 |
| CDY10828 | Canola | nucleus | 27.07 | 28.82 |
| GSMUA_Achr2P04340_001 | Banana | nucleus | 33.7 | 28.64 |
| CDY13289 | Canola | nucleus | 34.25 | 28.57 |
| CDX86738 | Canola | nucleus | 34.25 | 28.18 |
| CDY55821 | Canola | nucleus | 34.25 | 28.05 |
| CDX76346 | Canola | nucleus | 34.25 | 28.05 |
| VIT_16s0022g02400.t01 | Wine grape | nucleus | 11.6 | 26.58 |
| CDY41268 | Canola | nucleus | 9.94 | 26.09 |
| CDY10829 | Canola | nucleus | 9.94 | 26.09 |
| PGSC0003DMT400062319 | Potato | nucleus | 16.02 | 24.37 |
| CDX94141 | Canola | nucleus | 16.02 | 23.97 |
| PGSC0003DMT400065060 | Potato | nucleus | 12.71 | 20.72 |
| Solyc06g035570.1.1 | Tomato | nucleus | 6.08 | 20.37 |
| Os03t0834466-00 | Rice | nucleus | 6.63 | 18.46 |
| Os01t0903800-00 | Rice | cytosol, nucleus | 5.52 | 14.08 |
Protein Annotations
| MapMan:35.1 | GO:A0A078INT2 | UniProt:A0A078INT2 | EnsemblPlants:CDY51029 | ProteinID:CDY51029 | ProteinID:CDY51029.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00098061001 | InterPro:IPR002487 | PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF349 |
| InterPro:TF_Kbox | UniParc:UPI0004EF2ABA | SEG:seg | : | : | : |
Description
BnaC09g52900DBnaC09g52900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INT2]
Coordinates
chrLK032959:-:54496..58589
Molecular Weight (calculated)
21179.8 Da
IEP (calculated)
5.951
GRAVY (calculated)
-0.651
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGKIEIKK IENNGRLYEF SSSEMEKTIE RYGEFSNEYF VPGRPQVQPY LEELKKEMDI MVKKIDLLEV QQRKLMGQGL GLCSVAELQE IDIQIEKSLR
101: IVRSRKTELY ADQLGKLKEM EIEVLDERRR LREKEIKERL LRPLLPVTFH TEKGEPEGGY RTKHSSEVET DVFIGLPVAP P
101: IVRSRKTELY ADQLGKLKEM EIEVLDERRR LREKEIKERL LRPLLPVTFH TEKGEPEGGY RTKHSSEVET DVFIGLPVAP P
001: MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ SGRLHEYSSS QMEKIIDRYG KFSNAFYVAE RPQVERYLQE LKMEIDRMVK
101: KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD KGNTEGGHRT
201: KHSSEVETDL FIGLPVTRL
101: KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD KGNTEGGHRT
201: KHSSEVETDL FIGLPVTRL
Arabidopsis Description
AGL71AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.