Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41269 | Canola | nucleus | 96.47 | 96.47 |
| CDX98780 | Canola | nucleus | 81.76 | 63.47 |
| CDX94141 | Canola | nucleus | 42.35 | 59.5 |
| CDX76346 | Canola | nucleus | 67.06 | 51.58 |
| CDY55821 | Canola | nucleus | 67.06 | 51.58 |
| CDY68007 | Canola | nucleus | 44.12 | 50.0 |
| PGSC0003DMT400000030 | Potato | nucleus | 31.18 | 44.92 |
| CDX86738 | Canola | nucleus | 57.06 | 44.09 |
| CDY13289 | Canola | nucleus | 55.29 | 43.32 |
| Solyc10g017630.1.1 | Tomato | nucleus | 35.29 | 34.48 |
| CDX74755 | Canola | nucleus | 42.94 | 34.27 |
| CDY69077 | Canola | nucleus | 42.94 | 34.27 |
| CDY27368 | Canola | nucleus | 42.94 | 34.27 |
| CDY37054 | Canola | nucleus | 42.94 | 34.27 |
| CDY53886 | Canola | nucleus | 41.18 | 32.86 |
| Solyc01g092950.2.1 | Tomato | extracellular | 40.0 | 32.85 |
| CDY60689 | Canola | nucleus | 40.0 | 31.92 |
| CDY30701 | Canola | nucleus | 35.88 | 29.19 |
| CDY51029 | Canola | nucleus | 28.82 | 27.07 |
| CDY68754 | Canola | nucleus | 29.41 | 26.04 |
| VIT_16s0022g02380.t01 | Wine grape | nucleus | 32.35 | 25.94 |
| CDY16792 | Canola | nucleus | 28.24 | 24.87 |
| CDY38882 | Canola | nucleus | 30.59 | 23.74 |
| CDY38881 | Canola | nucleus | 28.24 | 23.53 |
| CDY32613 | Canola | nucleus | 30.0 | 23.29 |
| CDY00505 | Canola | nucleus | 28.24 | 22.02 |
| CDY42874 | Canola | nucleus | 29.41 | 21.93 |
| CDY55721 | Canola | nucleus | 27.06 | 20.91 |
| CDY02145 | Canola | nucleus | 25.29 | 20.38 |
| CDX94444 | Canola | nucleus | 25.88 | 20.09 |
| CDY52354 | Canola | nucleus | 25.88 | 20.09 |
| CDY66015 | Canola | nucleus | 24.71 | 19.18 |
| CDY51028 | Canola | nucleus | 25.29 | 18.61 |
| CDY56935 | Canola | nucleus | 21.76 | 18.14 |
| CDY32614 | Canola | nucleus | 6.47 | 9.91 |
| CDY10829 | Canola | nucleus | 3.53 | 8.7 |
| CDY41268 | Canola | nucleus | 3.53 | 8.7 |
| CDY00504 | Canola | nucleus | 1.76 | 4.92 |
Protein Annotations
| MapMan:35.1 | GO:A0A078FFG4 | UniProt:A0A078FFG4 | EnsemblPlants:CDY10828 | ProteinID:CDY10828 | ProteinID:CDY10828.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00048691001 | InterPro:IPR002487 | PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF349 | InterPro:TF_Kbox | UniParc:UPI0004EEA596 | SEG:seg | : | : |
Description
BnaC01g14430DBnaC01g14430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFG4]
Coordinates
chrLK032007:-:129081..130792
Molecular Weight (calculated)
19637.5 Da
IEP (calculated)
5.908
GRAVY (calculated)
-0.799
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMCIYIYSL IANTIERYQR RVKETGLNHK RDDNSQQARD EIYGLTKKIE QLEISKRKLL GEGIDACSIE ELQQLENQLE RGLTRIRAKK YQLLREEIEK
101: LKEEERNLIK ENTELKEKLH GMGAIVVASS SSTLSSAEVN MDDNGNMEVE TGLFIGPPET RQWKKIPPQN
101: LKEEERNLIK ENTELKEKLH GMGAIVVASS SSTLSSAEVN MDDNGNMEVE TGLFIGPPET RQWKKIPPQN
001: MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS SSIPKTVERY QKRIQDLGSN HKRNDNSQQS KDETYGLARK
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKERNL IAENKMLMEK CEMQGRGIIG RISSSSSTSE LDIDDNEMEV
201: VTDLFIGPPE TRHFKKFPPS N
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKERNL IAENKMLMEK CEMQGRGIIG RISSSSSTSE LDIDDNEMEV
201: VTDLFIGPPE TRHFKKFPPS N
Arabidopsis Description
AGL14Agamous-like MADS-box protein AGL14 [Source:UniProtKB/Swiss-Prot;Acc:Q38838]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.