Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38882 | Canola | nucleus | 98.17 | 98.17 |
| CDY00504 | Canola | nucleus | 24.2 | 86.89 |
| CDY00505 | Canola | nucleus | 76.71 | 77.06 |
| CDY51029 | Canola | nucleus | 63.01 | 76.24 |
| Solyc06g035570.1.1 | Tomato | nucleus | 18.26 | 74.07 |
| AT5G51870.3 | Thale cress | nucleus | 74.43 | 71.18 |
| CDY41268 | Canola | nucleus | 21.92 | 69.57 |
| CDY10829 | Canola | nucleus | 21.92 | 69.57 |
| CDY68754 | Canola | nucleus | 57.08 | 65.1 |
| VIT_16s0022g02400.t01 | Wine grape | nucleus | 23.29 | 64.56 |
| CDY38881 | Canola | nucleus | 57.99 | 62.25 |
| CDY32614 | Canola | nucleus | 28.77 | 56.76 |
| CDY30701 | Canola | nucleus | 52.05 | 54.55 |
| CDY56935 | Canola | nucleus | 50.23 | 53.92 |
| CDY52354 | Canola | nucleus | 53.88 | 53.88 |
| CDY02145 | Canola | nucleus | 51.6 | 53.55 |
| CDY16792 | Canola | nucleus | 47.03 | 53.37 |
| CDY66015 | Canola | nucleus | 52.97 | 52.97 |
| CDX94444 | Canola | nucleus | 52.05 | 52.05 |
| CDY51028 | Canola | nucleus | 54.79 | 51.95 |
| CDY55721 | Canola | nucleus | 52.05 | 51.82 |
| CDY42874 | Canola | nucleus | 53.88 | 51.75 |
| Os03t0834466-00 | Rice | nucleus | 15.07 | 50.77 |
| GSMUA_Achr10P... | Banana | nucleus | 46.12 | 50.0 |
| CDY68007 | Canola | nucleus | 34.25 | 50.0 |
| PGSC0003DMT400062319 | Potato | nucleus | 26.94 | 49.58 |
| CDY27368 | Canola | nucleus | 47.49 | 48.83 |
| CDY37054 | Canola | nucleus | 47.03 | 48.36 |
| Solyc03g006830.2.1 | Tomato | nucleus | 48.4 | 47.75 |
| GSMUA_Achr11P... | Banana | nucleus | 45.21 | 47.6 |
| CDX74755 | Canola | nucleus | 46.12 | 47.42 |
| CDY69077 | Canola | nucleus | 46.12 | 47.42 |
| PGSC0003DMT400065060 | Potato | nucleus | 23.74 | 46.85 |
| CDY60689 | Canola | nucleus | 44.29 | 45.54 |
| CDY53886 | Canola | nucleus | 44.29 | 45.54 |
| CDY13289 | Canola | nucleus | 44.75 | 45.16 |
| GSMUA_Achr2P04340_001 | Banana | nucleus | 43.84 | 45.07 |
| CDX86738 | Canola | nucleus | 44.75 | 44.55 |
| KRG91427 | Soybean | nucleus | 43.38 | 44.39 |
| KRH35396 | Soybean | nucleus | 43.38 | 44.39 |
| CDX98780 | Canola | nucleus | 43.84 | 43.84 |
| Os01t0903800-00 | Rice | cytosol, nucleus | 14.16 | 43.66 |
| CDY55821 | Canola | nucleus | 43.84 | 43.44 |
| CDX76346 | Canola | nucleus | 43.84 | 43.44 |
| CDY41269 | Canola | nucleus | 23.74 | 30.59 |
| CDY10828 | Canola | nucleus | 23.29 | 30.0 |
| CDX94141 | Canola | nucleus | 15.53 | 28.1 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078H719 | UniProt:A0A078H719 | EnsemblPlants:CDY32613 | ProteinID:CDY32613 |
| ProteinID:CDY32613.1 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00052638001 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 |
| PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF341 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EC59C9 | SEG:seg | : |
Description
BnaC03g15810DBnaC03g15810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H719]
Coordinates
chrLK032297:+:226698..230689
Molecular Weight (calculated)
25452.1 Da
IEP (calculated)
9.892
GRAVY (calculated)
-0.540
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGKIEIKK IENRTSRQIT FSKRRNGLFK KAHELSVLCD AQVAAIVFSQ SGRLYEFSSS EMEKTIERYG KFSPDYFVSG RPQEELYLLE LKKEMDIMVK
101: KIDLLEVHQR KLMGQGLGSC SLAQLQGLDT QIEKSLRIIR SRKAELYADQ LLKLKEKERE LLDQRRRLRE EEIRETLVRP MLPVTLHTGK DETGSACRMS
201: KHSSEVETDL FIGFPVTRL
101: KIDLLEVHQR KLMGQGLGSC SLAQLQGLDT QIEKSLRIIR SRKAELYADQ LLKLKEKERE LLDQRRRLRE EEIRETLVRP MLPVTLHTGK DETGSACRMS
201: KHSSEVETDL FIGFPVTRL
001: MNLGMNIAGT MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ SGRLHEYSSS QMEKIIDRYG KFSNAFYVAE RPQVERYLQE
101: LKMEIDRMVK KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD
201: KGNTEGGHRT KHSSEVETDL FIGLPVTRL
101: LKMEIDRMVK KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD
201: KGNTEGGHRT KHSSEVETDL FIGLPVTRL
Arabidopsis Description
AGL71AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.