Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028283.1-P | Field mustard | nucleus | 85.78 | 93.97 |
| CDY00504 | Canola | nucleus | 24.77 | 88.52 |
| CDY51029 | Canola | nucleus | 72.94 | 87.85 |
| CDY32613 | Canola | nucleus | 77.06 | 76.71 |
| CDY38882 | Canola | nucleus | 76.61 | 76.26 |
| Solyc06g035570.1.1 | Tomato | nucleus | 18.35 | 74.07 |
| AT5G51870.3 | Thale cress | nucleus | 74.77 | 71.18 |
| CDY41268 | Canola | nucleus | 21.56 | 68.12 |
| CDY10829 | Canola | nucleus | 21.56 | 68.12 |
| VIT_16s0022g02400.t01 | Wine grape | nucleus | 23.39 | 64.56 |
| CDY68754 | Canola | nucleus | 55.05 | 62.5 |
| CDY38881 | Canola | nucleus | 55.96 | 59.8 |
| CDY32614 | Canola | nucleus | 30.28 | 59.46 |
| CDY66015 | Canola | nucleus | 56.42 | 56.16 |
| CDY52354 | Canola | nucleus | 56.42 | 56.16 |
| CDY56935 | Canola | nucleus | 51.83 | 55.39 |
| CDX94444 | Canola | nucleus | 55.05 | 54.79 |
| CDY55721 | Canola | nucleus | 55.05 | 54.55 |
| CDY42874 | Canola | nucleus | 55.96 | 53.51 |
| CDY02145 | Canola | nucleus | 50.92 | 52.61 |
| CDY30701 | Canola | nucleus | 50.0 | 52.15 |
| CDY16792 | Canola | nucleus | 45.87 | 51.81 |
| Os03t0834466-00 | Rice | nucleus | 15.14 | 50.77 |
| CDY51028 | Canola | nucleus | 53.21 | 50.22 |
| CDY68007 | Canola | nucleus | 33.95 | 49.33 |
| PGSC0003DMT400062319 | Potato | nucleus | 26.15 | 47.9 |
| PGSC0003DMT400065060 | Potato | nucleus | 24.31 | 47.75 |
| GSMUA_Achr10P... | Banana | nucleus | 42.66 | 46.04 |
| CDX74755 | Canola | nucleus | 44.95 | 46.01 |
| CDY69077 | Canola | nucleus | 44.95 | 46.01 |
| CDY27368 | Canola | nucleus | 44.95 | 46.01 |
| CDY37054 | Canola | nucleus | 44.95 | 46.01 |
| GSMUA_Achr11P... | Banana | nucleus | 43.58 | 45.67 |
| CDY53886 | Canola | nucleus | 44.04 | 45.07 |
| KRH35396 | Soybean | nucleus | 44.04 | 44.86 |
| KRG91427 | Soybean | nucleus | 44.04 | 44.86 |
| CDY60689 | Canola | nucleus | 43.58 | 44.6 |
| Solyc03g006830.2.1 | Tomato | nucleus | 45.41 | 44.59 |
| Os01t0903800-00 | Rice | cytosol, nucleus | 14.22 | 43.66 |
| GSMUA_Achr2P04340_001 | Banana | nucleus | 41.74 | 42.72 |
| CDX98780 | Canola | nucleus | 41.74 | 41.55 |
| CDY13289 | Canola | nucleus | 41.28 | 41.47 |
| CDX86738 | Canola | nucleus | 41.28 | 40.91 |
| CDY55821 | Canola | nucleus | 41.28 | 40.72 |
| CDX76346 | Canola | nucleus | 41.28 | 40.72 |
| CDY41269 | Canola | nucleus | 22.48 | 28.82 |
| CDY10828 | Canola | nucleus | 22.02 | 28.24 |
| CDX94141 | Canola | nucleus | 15.14 | 27.27 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078EEL2 | EnsemblPlants:CDY00505 | ProteinID:CDY00505 | ProteinID:CDY00505.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00110227001 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | PFscan:PS50066 | PFscan:PS51297 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF341 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI0004EE76D2 | SEG:seg | : | : | : |
Description
BnaA10g07680D
Coordinates
chrLK031919:-:863870..869902
Molecular Weight (calculated)
25233.8 Da
IEP (calculated)
8.696
GRAVY (calculated)
-0.414
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ NGRLYEFSSS EMEKTIERYG DFRNEYFVLG RPQVQPYLEE LKKEMDIMVK
101: KIDLLEVQQR KLMGQGLGSC SVAELQEIDI QIEKSLRIVR SRKAELYADQ LGKLKEMCFS HTCYEKILCF QEIRERLLRP LLPVTLHTEK GEPEGGYRTK
201: HSSEVETDLF IGLPVARP
101: KIDLLEVQQR KLMGQGLGSC SVAELQEIDI QIEKSLRIVR SRKAELYADQ LGKLKEMCFS HTCYEKILCF QEIRERLLRP LLPVTLHTEK GEPEGGYRTK
201: HSSEVETDLF IGLPVARP
001: MVRGKIEIKK IENVTSRQVT FSKRRSGLFK KAHELSVLCD AQVAAIVFSQ SGRLHEYSSS QMEKIIDRYG KFSNAFYVAE RPQVERYLQE LKMEIDRMVK
101: KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD KGNTEGGHRT
201: KHSSEVETDL FIGLPVTRL
101: KIDLLEVHHR KLLGQGLDSC SVTELQEIDT QIEKSLRIVR SRKAELYADQ LKKLKEKERE LLNERKRLLE EQNRERLMRP VVPATLQICD KGNTEGGHRT
201: KHSSEVETDL FIGLPVTRL
Arabidopsis Description
AGL71AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.