Factsheet for Bra026403.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012779.1-P
Bra033495.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26780.1	Bra012779.1-P	AT4G15560.1	24104567
AT4G26780.1	Bra033495.1-P	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89303	Canola	mitochondrion	88.61	76.62
Bra010427.1-P	Field mustard	mitochondrion	73.67	66.13
AT4G26780.1	Thale cress	mitochondrion	69.39	59.63
Bra002925.1-P	Field mustard	mitochondrion	51.25	49.15
KRG98682	Soybean	mitochondrion	48.75	47.24
KRH46251	Soybean	mitochondrion	47.33	46.02
Solyc07g064930.2.1	Tomato	mitochondrion, plastid	48.75	45.82
PGSC0003DMT400057433	Potato	mitochondrion	47.69	45.42
GSMUA_Achr5P27100_001	Banana	mitochondrion	47.69	44.82
VIT_19s0090g01190.t01	Wine grape	mitochondrion	50.89	44.14
TraesCS5A01G176600.3	Wheat	mitochondrion	46.62	43.52
TraesCS5D01G180300.1	Wheat	mitochondrion	46.62	43.52
HORVU5Hr1G053680.2	Barley	mitochondrion	46.26	43.19
TraesCS5B01G173300.1	Wheat	mitochondrion	46.26	43.19
PGSC0003DMT400033475	Potato	mitochondrion	51.6	43.15
EER96498	Sorghum	mitochondrion	44.84	41.31
Zm00001d005513_P001	Maize	mitochondrion	43.77	40.59
KRH73804	Soybean	mitochondrion	49.82	40.58
Os09t0284400-01	Rice	mitochondrion	42.7	39.74
Solyc12g014470.1.1	Tomato	mitochondrion	47.33	39.7
Os08t0338700-01	Rice	mitochondrion	43.42	39.23
Zm00001d050123_P001	Maize	mitochondrion	44.13	37.35
KXG25038	Sorghum	plastid	45.55	35.65

Protein Annotations

MapMan:19.1.3.3	Gene3D:3.90.20.20	EnsemblPlantsGene:Bra026403	EnsemblPlants:Bra026403.1	EnsemblPlants:Bra026403.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0000774	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0030234	GO:GO:0042803	GO:GO:0050790	GO:GO:0051087
InterPro:GrpE	InterPro:GrpE_coiled_coil	InterPro:IPR013805	UniProt:M4EC94	PFAM:PF01025	PRINTS:PR00773
PANTHER:PTHR21237	PANTHER:PTHR21237:SF28	SUPFAM:SSF58014	UniParc:UPI000254556F	SEG:seg	:

Description

AT4G26780 (E=1e-068) AR192 | AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization

Coordinates

chrA01:-:9522267..9523722

Molecular Weight (calculated)

30745.6 Da

IEP (calculated)

4.780

GRAVY (calculated)

-0.777

Length

281 amino acids

Sequence
(BLAST)

001: MFASRILSRV SRSAGLRSSL SAAGAALPAR SQTPILSRRY HSIVHEFSQK LAAAQVPLDS FPLQRFSFSS STTPESNEKE SNTEASSKTT GEKATADANE
101: SGLESEPSKD SRRGKGAKRG AVSDSDSGSD DEEELSRDEL MKLVAEKEEL LSEKEEEIKQ MKDKVLRTYA EMENVMDRTR RDAENTKKYA IQNFAKSLLD
201: VADNLGRASS VVKESFSKLD TTKEDSAGAT PLLKTLLEGV EMTEKQLAES GYTLFDRVIR PAEVGVTQGG ESEEDKKESD A

Best Arabidopsis Sequence Match ( AT4G26780.1 )
(BLAST)

001: MLVLRILSRV TRNAGIRSSL SAVTLPARNQ TPVFSSRFHS LAHDFSHKLV PAQMSMMDSF ALQRFNFSSS TSPESDEKKT HTEASKTSEE KPTAEANQPG
101: LDSESKDSVT DSAKRKRKGA KGAASSSSES DSESDDDELS ADDLVKLVAE KEELLSEKEE EIKQLKDKVL RTYAEMENVM DRTRRDAENT KKYAVQNFAK
201: SLLDVADNLG RASSVVKESF SKLDTSEDSA GAAPLLKTLL EGVEMTEKQL AEVFKKFGME KYDPINEPFD PNRHNAVFQV PDASKPEGTV AHVLKSGYTL
301: YDRVIRPAEV GVTQGGENQE EKKESDA

Arabidopsis Description

AR192GrpE protein homolog 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.