Factsheet for Bra010427.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012779.1-P
Bra033495.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26780.1	Bra012779.1-P	AT4G15560.1	24104567
AT4G26780.1	Bra033495.1-P	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14299	Canola	mitochondrion	86.26	93.1
CDX97366	Canola	mitochondrion	84.34	92.63
Bra026403.1-P	Field mustard	mitochondrion	66.13	73.67
AT4G26780.1	Thale cress	mitochondrion	74.44	71.25
Bra002925.1-P	Field mustard	mitochondrion	54.63	58.36
KRG98682	Soybean	mitochondrion	51.12	55.17
Solyc07g064930.2.1	Tomato	mitochondrion, plastid	52.4	54.85
PGSC0003DMT400057433	Potato	mitochondrion	51.12	54.24
GSMUA_Achr5P27100_001	Banana	mitochondrion	51.76	54.18
KRH46251	Soybean	mitochondrion	49.84	53.98
EER96498	Sorghum	mitochondrion	51.76	53.11
VIT_19s0090g01190.t01	Wine grape	mitochondrion	53.35	51.54
HORVU5Hr1G053680.2	Barley	mitochondrion	49.52	51.49
TraesCS5A01G176600.3	Wheat	mitochondrion	49.52	51.49
TraesCS5D01G180300.1	Wheat	mitochondrion	49.2	51.16
TraesCS5B01G173300.1	Wheat	mitochondrion	49.2	51.16
Zm00001d005513_P001	Maize	mitochondrion	48.88	50.49
Os09t0284400-01	Rice	mitochondrion	48.24	50.0
PGSC0003DMT400033475	Potato	mitochondrion	52.4	48.81
KRH73804	Soybean	mitochondrion	53.35	48.41
Os08t0338700-01	Rice	mitochondrion	47.28	47.59
Solyc12g014470.1.1	Tomato	mitochondrion	50.48	47.16
Zm00001d050123_P001	Maize	mitochondrion	47.28	44.58
KXG25038	Sorghum	plastid	47.92	41.78

Protein Annotations

MapMan:19.1.3.3	Gene3D:2.30.22.10	Gene3D:3.90.20.20	EnsemblPlantsGene:Bra010427	EnsemblPlants:Bra010427.1	EnsemblPlants:Bra010427.1-P
ncoils:Coil	GO:GO:0000166	GO:GO:0000774	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234	GO:GO:0042803	GO:GO:0050790
GO:GO:0051087	InterPro:GrpE	InterPro:GrpE_coiled_coil	InterPro:GrpE_head	InterPro:IPR009012	InterPro:IPR013805
UniProt:M4D1S7	HAMAP:MF_01151	PFAM:PF01025	PRINTS:PR00773	ScanProsite:PS01071	PANTHER:PTHR21237
PANTHER:PTHR21237:SF28	SUPFAM:SSF51064	SUPFAM:SSF58014	UniParc:UPI000254585A	SEG:seg	:

Description

AT4G26780 (E=7e-081) AR192 | AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization

Coordinates

chrA08:+:14471559..14472821

Molecular Weight (calculated)

34071.8 Da

IEP (calculated)

5.094

GRAVY (calculated)

-0.648

Length

313 amino acids

Sequence
(BLAST)

001: MLASRILSRV SRSAGLRSSL SAAALPARNQ APMVTSRYHS LVNNFSQKLV AAQVPLDSFS LQRFSLSSTS TTPESHEKES SNTEASKTAE ANESGPDSES
101: KASAGKGAVS ESDSESGDDG EEMSKDDLMK LVAEKEELLS VKEEEIKKMK DKVLRTYAEM ENVMDRTRRD AENTKKYALQ NFAKSLLDVA DNLGRASSVV
201: KESFSKLDAT SKDSAAGAAP LLKTLLEGVE MTEKQLAEVF KKFGMEKYNP INEPFDPNRH NAMFQVADAS KPEGTVAHVL KAGYTLYDRV IRPAEVGVTQ
301: GGESEENKKE SDA

Best Arabidopsis Sequence Match ( AT4G26780.1 )
(BLAST)

001: MLVLRILSRV TRNAGIRSSL SAVTLPARNQ TPVFSSRFHS LAHDFSHKLV PAQMSMMDSF ALQRFNFSSS TSPESDEKKT HTEASKTSEE KPTAEANQPG
101: LDSESKDSVT DSAKRKRKGA KGAASSSSES DSESDDDELS ADDLVKLVAE KEELLSEKEE EIKQLKDKVL RTYAEMENVM DRTRRDAENT KKYAVQNFAK
201: SLLDVADNLG RASSVVKESF SKLDTSEDSA GAAPLLKTLL EGVEMTEKQL AEVFKKFGME KYDPINEPFD PNRHNAVFQV PDASKPEGTV AHVLKSGYTL
301: YDRVIRPAEV GVTQGGENQE EKKESDA

Arabidopsis Description

AR192GrpE protein homolog 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.