Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011479.1-P | Field mustard | cytosol | 98.73 | 98.73 |
| CDX69014 | Canola | cytosol | 97.03 | 92.71 |
| CDY49386 | Canola | nucleus | 72.46 | 74.35 |
| CDX72441 | Canola | cytosol, nucleus, peroxisome | 70.34 | 73.78 |
| AT4G33940.1 | Thale cress | cytosol | 70.76 | 63.74 |
| PGSC0003DMT400061164 | Potato | cytosol, nucleus, peroxisome | 40.68 | 42.48 |
| Solyc01g103970.2.1 | Tomato | cytosol | 38.98 | 40.53 |
| CDY25740 | Canola | cytosol, nucleus, plasma membrane | 29.24 | 36.9 |
| GSMUA_Achr7P23200_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 28.81 | 36.76 |
| CDY12526 | Canola | cytosol, nucleus, plasma membrane | 28.81 | 36.36 |
| CDX96380 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.39 | 36.22 |
| CDX72875 | Canola | cytosol, nucleus, plasma membrane | 27.97 | 35.68 |
| GSMUA_Achr8P08140_001 | Banana | plasma membrane | 27.54 | 35.33 |
| Solyc01g103980.2.1 | Tomato | mitochondrion | 46.61 | 35.26 |
| PGSC0003DMT400061161 | Potato | nucleus | 45.34 | 34.52 |
| GSMUA_Achr6P18810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 27.12 | 34.41 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 26.27 | 33.7 |
| TraesCS4A01G352200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 26.27 | 31.63 |
| TraesCS5B01G519400.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 26.27 | 31.47 |
| TraesCS5D01G518700.2 | Wheat | cytosol, nucleus, plasma membrane, plastid | 26.27 | 31.47 |
| EER90557 | Sorghum | endoplasmic reticulum, nucleus, peroxisome | 24.15 | 29.84 |
| HORVU3Hr1G111110.1 | Barley | plastid | 21.19 | 29.07 |
| TraesCS3B01G567600.1 | Wheat | mitochondrion | 22.88 | 26.34 |
| TraesCS3D01G511300.1 | Wheat | mitochondrion | 22.88 | 26.21 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | GO:A0A068F627 | UniProt:A0A068F627 | ProteinID:AID60111.1 | ProteinID:AID60154.1 |
| EnsemblPlants:CDX75389 | ProteinID:CDX75389 | ProteinID:CDX75389.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0061630 |
| EnsemblPlantsGene:GSBRNA2T00121271001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF00097 | ScanProsite:PS00518 | PFscan:PS50089 |
| PANTHER:PTHR22894 | PANTHER:PTHR22894:SF4 | InterPro:RNF170 | SMART:SM00184 | SUPFAM:SSF57850 | TMHMM:TMhelix |
| UniParc:UPI0004A8826D | InterPro:Znf_C3HC4_RING-type | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
BnaA01g03130DBnaA01g03130D protein [Source:UniProtKB/TrEMBL;Acc:A0A068F627]
Coordinates
chrLK031804:+:902714..903990
Molecular Weight (calculated)
26848.6 Da
IEP (calculated)
7.359
GRAVY (calculated)
-0.139
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKTDEVNA TATETHGRSE PEEASNAVVL ADGAVTTEER KKIQSETPPE DDCCPICFGS FTVPCRGDCG HWYCGSCILQ YWNYAAVSRP CKCPMCVRHI
101: TKLSPEASLQ QRQEPEVKEV LAKIRRYNRL FVGGLTGFLQ KVQELPLLMK RMVWHIMDPD TTNLHFNEVR IFAMLMSTLY TATEFNFIPT GGFRIVTVFE
201: FSAIAMILIL RLVGVYRRRR LAQRVRHVAA AELEPE
101: TKLSPEASLQ QRQEPEVKEV LAKIRRYNRL FVGGLTGFLQ KVQELPLLMK RMVWHIMDPD TTNLHFNEVR IFAMLMSTLY TATEFNFIPT GGFRIVTVFE
201: FSAIAMILIL RLVGVYRRRR LAQRVRHVAA AELEPE
001: MSSLGSSKSL RDEMEVTTAD VFPEVNAAAV TENLDRNELV LADGVVSAEE RNIEPDNRGE RKIESESPPE DDVCPICFGS FTVPCRGNCG HWYCGNCILQ
101: YWNYAAISRP CKCPMCVRHI TKLSPEPSLQ ERQEQEVKEV LDKVRRYNRL FVGGLTGFVQ KVHELPFLVK RMVWHMMDTD VNNLYFHEVR IFAMFMSTLY
201: TAAEFNFIPT GGFRIVTVFD YAAIAMILIL RLVGIYRRRR LAQQVRHLAA AAIEPELEQR EL
101: YWNYAAISRP CKCPMCVRHI TKLSPEPSLQ ERQEQEVKEV LDKVRRYNRL FVGGLTGFVQ KVHELPFLVK RMVWHMMDTD VNNLYFHEVR IFAMFMSTLY
201: TAAEFNFIPT GGFRIVTVFD YAAIAMILIL RLVGIYRRRR LAQQVRHLAA AAIEPELEQR EL
Arabidopsis Description
At4g33940 [Source:UniProtKB/TrEMBL;Acc:Q501G9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.