Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15463 | Canola | nucleus | 36.44 | 45.66 |
| CDY51392 | Canola | nucleus | 41.81 | 42.47 |
| KRH56025 | Soybean | mitochondrion, nucleus | 18.79 | 36.44 |
| KRH25503 | Soybean | nucleus | 27.4 | 34.04 |
| Os05t0502800-01 | Rice | nucleus | 28.11 | 29.22 |
| VIT_12s0059g01970.t01 | Wine grape | nucleus | 28.95 | 28.87 |
| GSMUA_Achr5P00860_001 | Banana | nucleus | 20.48 | 27.05 |
| TraesCS6B01G251300.1 | Wheat | nucleus | 22.32 | 26.83 |
| TraesCS6A01G230600.1 | Wheat | nucleus | 22.46 | 26.46 |
| PGSC0003DMT400047290 | Potato | nucleus | 27.54 | 26.25 |
| GSMUA_Achr9P12240_001 | Banana | cytosol | 23.31 | 25.82 |
| EES19773 | Sorghum | nucleus | 25.85 | 25.03 |
| HORVU6Hr1G056850.1 | Barley | plastid | 24.58 | 24.96 |
| TraesCS6D01G204400.1 | Wheat | mitochondrion, nucleus | 23.73 | 24.17 |
| Solyc07g054460.2.1 | Tomato | nucleus | 25.42 | 23.14 |
| Zm00001d038622_P001 | Maize | plastid | 24.43 | 23.04 |
| TraesCS1A01G322700.1 | Wheat | plastid | 25.71 | 20.8 |
| TraesCS1B01G335000.1 | Wheat | cytosol, mitochondrion | 26.13 | 20.58 |
| TraesCS1D01G323100.1 | Wheat | cytosol | 26.84 | 20.5 |
| HORVU1Hr1G065830.1 | Barley | extracellular, nucleus, plastid | 26.41 | 20.24 |
Protein Annotations
| EnsemblPlants:CDY64129 | EnsemblPlantsGene:GSBRNA2T00040910001 | Gene3D:2.40.10.230 | GO:A0A078JCL6 | GO:GO:0001522 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0042254 | InterPro:Gar1/Naf1_Cbf5-bd_sf | InterPro:H/ACA_rnp_Gar1/Naf1 |
| InterPro:IPR038664 | InterPro:Transl_B-barrel_sf | ncoils:Coil | PFAM:PF04410 | ProteinID:CDY64129 | ProteinID:CDY64129.1 |
| SEG:seg | SUPFAM:SSF50447 | UniParc:UPI0004EDF7A6 | UniProt:A0A078JCL6 | MapMan:17.1.1.2.2.1.4 | : |
Description
BnaCnng43190DBnaCnng43190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCL6]
Coordinates
chrLK034406:-:23624..26280
Molecular Weight (calculated)
78589.7 Da
IEP (calculated)
4.121
GRAVY (calculated)
-0.972
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGFPAKQPI EEGEELPIDQ DSKVKTFKDA VDFPSIDSYL DFDSCNWLGN NPSIEEFGVK DTDFDFFEDD MEEEGIGQGA VAVGEENQNT VLPELCGGVT
101: EEDIEAAEPA LKELETAVSD KSKPMEDVSA SVDCPTMKKT DVSLALGLEK VSLNMGDDEA KGKSISIAES ESEASSSSSS SSSSSEEEEE EESDDEEDSE
201: EEEEEEEKCE DEKMVIVKED GVAGELEEGE IESADEVEED SDDDDEDEVN EMIAWSNDED DDLGLQTKDP IRSKNELKDL PPVPAVDVSL EPHHVTLPVG
301: VVLSVMSTQV IVEGMEQHSP LTEGSILWIT ERRTPLGLVD EIFGPVKCPY YIVRFNSESE VPEGVSQGTP VSFVADFAQH ILNIKELQKK GYDASGDNDE
401: EIPDELEFSD DEKEAEYRRM QKMEKRGMVN DQKNGNARNK KKKNRDHHGS SSSLSSNRCD PQMGGPVSNH HQPRPQMDGF PPNNGGAPWR PQSNQQNQFQ
501: LPPMANQMGM PNLGPMQMPM MGMQNQNQMM FPPQFNGGQM PMPMPMPGGL NFFPGQGSAP WPALNCFNQQ QFGGMGRGIQ HPQLPNMFAS QGFQMQQPQS
601: QMQRPPQFQM QPQFQTRPQY QMMNSNRPPS PMNPQFQMQP QSEIRPQSQV PQRSPTNQES PVQEQSQGFS NGQSSERGRG HRGGRGRGRG RGRGRFGRGR
701: GRGRQQSG
101: EEDIEAAEPA LKELETAVSD KSKPMEDVSA SVDCPTMKKT DVSLALGLEK VSLNMGDDEA KGKSISIAES ESEASSSSSS SSSSSEEEEE EESDDEEDSE
201: EEEEEEEKCE DEKMVIVKED GVAGELEEGE IESADEVEED SDDDDEDEVN EMIAWSNDED DDLGLQTKDP IRSKNELKDL PPVPAVDVSL EPHHVTLPVG
301: VVLSVMSTQV IVEGMEQHSP LTEGSILWIT ERRTPLGLVD EIFGPVKCPY YIVRFNSESE VPEGVSQGTP VSFVADFAQH ILNIKELQKK GYDASGDNDE
401: EIPDELEFSD DEKEAEYRRM QKMEKRGMVN DQKNGNARNK KKKNRDHHGS SSSLSSNRCD PQMGGPVSNH HQPRPQMDGF PPNNGGAPWR PQSNQQNQFQ
501: LPPMANQMGM PNLGPMQMPM MGMQNQNQMM FPPQFNGGQM PMPMPMPGGL NFFPGQGSAP WPALNCFNQQ QFGGMGRGIQ HPQLPNMFAS QGFQMQQPQS
601: QMQRPPQFQM QPQFQTRPQY QMMNSNRPPS PMNPQFQMQP QSEIRPQSQV PQRSPTNQES PVQEQSQGFS NGQSSERGRG HRGGRGRGRG RGRGRFGRGR
701: GRGRQQSG
001: MVGFPANQAK TVEEELPLQV VADQDPKVKT FKDSFDFPSI DSFPDFDSIT WSESNRNVED FSIEDTDFDF FEYHMEIPQE DVVTVSDVMC PENQTTVNSE
101: SIEGKLEVFN DDMSGEVGVS SVRSESMVEV KPVLCDVMSE EVGVSSVEVE PNVCVEMSAN GGDEPAVKDS EPVVSENSRS MEGETEPVVV SDASVACPTM
201: DLDESGLKKT DEGLACSIEV GLEKVSLAVD DDEKSDEAKG EMDSAESESE TSSSSASSSD SSSSEEEESD EDESDKEENK KEEKFEHMVV GKEDDLAGEL
301: EEGEIENLDE ENGDDDIEDE DDDDDDDDDD DDDVNEMVAW SNDEDDDLGL QTKEPIRSKN ELKELPPVPP VDVTLEPHHA TLPVGVVLSV MSAQVIVEGM
401: EKHSPLTEGS ILWITEKRTP LGLVDEIFGP VKCPYYIVRF NSESEVPEGV CQGTPVSFVA DFAQHILNIK ELQKKGYDAS GDNDEEIPDE LEFSDDEKEA
501: EYRRMQKLEK RGMMSDQKTG NTRNKKKKNR DPGRPTSSYS GEWTKNQGSS SLSSNRSDPQ MGGPRPQMDG FPPNNAAWRP QSNQQNPYQL PPIPNQMGMQ
601: IPFMAMQNQN QMMFQPQFNG GQMPMPGGPG GLNFFPGQAS APWPAMVGQN CFNQQFGMGR GIQQQPLPNE LSFNMFSQGL QMHPPQSQMH RPQSQMNPQF
701: QMPPQFQPHQ QSPMNPQYQM MHRPQSPANP QFQMQAQSDV RPLQSQIPQS PSDLQSPMEP QSQGFSSGQS SERGRGFHGR GRGRGRGRFG RGRGRGRQQS
801: G
101: SIEGKLEVFN DDMSGEVGVS SVRSESMVEV KPVLCDVMSE EVGVSSVEVE PNVCVEMSAN GGDEPAVKDS EPVVSENSRS MEGETEPVVV SDASVACPTM
201: DLDESGLKKT DEGLACSIEV GLEKVSLAVD DDEKSDEAKG EMDSAESESE TSSSSASSSD SSSSEEEESD EDESDKEENK KEEKFEHMVV GKEDDLAGEL
301: EEGEIENLDE ENGDDDIEDE DDDDDDDDDD DDDVNEMVAW SNDEDDDLGL QTKEPIRSKN ELKELPPVPP VDVTLEPHHA TLPVGVVLSV MSAQVIVEGM
401: EKHSPLTEGS ILWITEKRTP LGLVDEIFGP VKCPYYIVRF NSESEVPEGV CQGTPVSFVA DFAQHILNIK ELQKKGYDAS GDNDEEIPDE LEFSDDEKEA
501: EYRRMQKLEK RGMMSDQKTG NTRNKKKKNR DPGRPTSSYS GEWTKNQGSS SLSSNRSDPQ MGGPRPQMDG FPPNNAAWRP QSNQQNPYQL PPIPNQMGMQ
601: IPFMAMQNQN QMMFQPQFNG GQMPMPGGPG GLNFFPGQAS APWPAMVGQN CFNQQFGMGR GIQQQPLPNE LSFNMFSQGL QMHPPQSQMH RPQSQMNPQF
701: QMPPQFQPHQ QSPMNPQYQM MHRPQSPANP QFQMQAQSDV RPLQSQIPQS PSDLQSPMEP QSQGFSSGQS SERGRGFHGR GRGRGRGRFG RGRGRGRQQS
801: G
Arabidopsis Description
ATNAF1NAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178WI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.