Factsheet for HORVU7Hr1G060260.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58330.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G197000.2	Wheat	mitochondrion, plastid	96.77	97.22
TraesCSU01G135100.2	Wheat	plastid	96.07	96.52
TraesCS7D01G283900.1	Wheat	golgi	87.99	88.4
HORVU4Hr1G090080.1	Barley	cytosol	73.44	87.85
Os08t0562100-01	Rice	plastid	85.68	85.68
Zm00001d031899_P002	Maize	plastid	82.91	83.1
EES15165	Sorghum	plastid	81.99	82.75
KXG25370	Sorghum	plastid	81.99	81.61
GSMUA_AchrUn_...	Banana	cytosol	45.5	79.76
PGSC0003DMT400079767	Potato	cytosol, plastid	75.52	74.66
Solyc11g007990.1.1	Tomato	plastid	75.75	74.21
VIT_13s0019g05250.t01	Wine grape	plastid	74.6	73.91
KRH34668	Soybean	plastid	74.13	73.62
KRG92120	Soybean	plastid	72.06	73.58
CDY58562	Canola	plastid	75.29	73.42
CDX88669	Canola	plastid	75.29	73.42
Bra006772.1-P	Field mustard	plastid	75.29	73.42
CDY32993	Canola	plastid	74.6	73.08
CDY02811	Canola	plastid	74.6	73.08
CDY32711	Canola	plastid	74.6	72.91
Bra002660.1-P	Field mustard	plastid	74.36	72.85
CDY43863	Canola	plastid	74.36	72.69
Bra020374.1-P	Field mustard	plastid	74.36	72.69
AT5G58330.1	Thale cress	plastid	73.67	72.01
Solyc03g071590.2.1	Tomato	plastid	74.6	69.16
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi, peroxisome	76.67	68.17
GSMUA_AchrUn_...	Banana	nucleus, peroxisome, plastid	18.24	58.52
HORVU1Hr1G041250.5	Barley	extracellular	30.72	39.94

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00620+1.1.1.82	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37
KEGG:00710+1.1.1.37	KEGG:00710+1.1.1.82	KEGG:00720+1.1.1.37	MapMan:1.2.12	Gene3D:3.40.50.720	Gene3D:3.90.110.10
UniProt:A0A287WNJ5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016615	GO:GO:0016616	GO:GO:0046554
GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G060260	EnsemblPlants:HORVU7Hr1G060260.5	InterPro:IPR015955	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N
InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS	InterPro:Malate_DH_NADP-dep_pln	InterPro:Malate_DH_type2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056
PFAM:PF02866	ScanProsite:PS00068	PANTHER:PTHR23382	PANTHER:PTHR23382:SF0	SUPFAM:SSF51735	SUPFAM:SSF56327
TIGRFAMs:TIGR01757	TIGRFAMs:TIGR01759	UniParc:UPI000B476B30	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:A0A287WNJ5]

Coordinates

chrchr7H:-:275642765..275647713

Molecular Weight (calculated)

46946.3 Da

IEP (calculated)

6.087

GRAVY (calculated)

-0.108

Length

433 amino acids

Sequence
(BLAST)

001: MDFSSLARPQ ALRCGSTGAL GAHAARRRSA QLLCPRRPTF RCSVEAARQQ VQGTLAAEAA AEAARNECFG VFCTTYDLEA DEKTKSWKKL VNVSVSGAAG
101: MISNHLLFKL ASGEVFGQDQ PIALKLLGSE RSLQALEGVA MELEDSLYPL LREVSIGVDP YVIFEDADWA LLIGAKPRGP GVERAALLDI NGQIFAEQGK
201: ALNAVASRNV KVIVVGNPCN TNALICLKNA PSLPAKNFHA LTRLDENRAK CQLALKAGVF YDKISNMTIW GNHSTTQVPD FLNAKINGRP VKEVIEDTKW
301: LEEDFTITVQ KRGGVLIQKW GRSSAASTAV SIVDAMRSLV TPTPEGDWFS TGVYTTGNPY GIVDDIVFSM PCRSKGDGDY ELVKDVAMDD FLWGRIKKSE
401: AELIAEKRCV AHLTGEGNAF CDLPGDTMLP GEM

Best Arabidopsis Sequence Match ( AT5G58330.1 )
(BLAST)

001: MAMAELSTPK TTSPFLNSSS RLRLSSKLHL SNHFRHLLLP PLHTTTPNSK ISCSVSQNSQ APVAVQENGL VKTKKECYGV FCLTYDLKAE EETRSWKKLI
101: NIAVSGAAGM ISNHLLFKLA SGEVFGPDQP IALKLLGSER SIQALEGVAM ELEDSLFPLL REVDIGTDPN EVFQDVEWAI LIGAKPRGPG MERADLLDIN
201: GQIFAEQGKA LNKAASPNVK VLVVGNPCNT NALICLKNAP NIPAKNFHAL TRLDENRAKC QLALKAGVFY DKVSNMTIWG NHSTTQVPDF LNARINGLPV
301: KEVITDHKWL EEGFTESVQK RGGLLIQKWG RSSAASTAVS IVDAIKSLVT PTPEGDWFST GVYTDGNPYG IEEGLVFSMP CRSKGDGDYE LVKDVEIDDY
401: LRQRIAKSEA ELLAEKRCVA HLTGEGIAYC DLGPVDTMLP GEV

Arabidopsis Description

Malate dehydrogenase [NADP], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.