CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92120	Soybean	plastid	94.5	97.17
VIT_13s0019g05250.t01	Wine grape	plastid	81.88	81.69
PGSC0003DMT400079767	Potato	cytosol, plastid	80.73	80.37
Solyc11g007990.1.1	Tomato	plastid	80.96	79.86
AT5G58330.1	Thale cress	plastid	80.5	79.23
HORVU4Hr1G090080.1	Barley	cytosol	65.6	79.01
GSMUA_AchrUn_...	Banana	cytosol	44.72	78.95
Bra002660.1-P	Field mustard	plastid	79.13	78.05
CDY02811	Canola	plastid	79.13	78.05
CDY43863	Canola	plastid	79.13	77.88
Bra020374.1-P	Field mustard	plastid	79.13	77.88
CDY32711	Canola	plastid	79.13	77.88
CDY32993	Canola	plastid	78.9	77.83
CDY58562	Canola	plastid	78.9	77.48
Bra006772.1-P	Field mustard	plastid	78.9	77.48
CDX88669	Canola	plastid	78.9	77.48
Os08t0562100-01	Rice	plastid	76.83	77.37
Zm00001d031899_P002	Maize	plastid	75.92	76.62
EES15165	Sorghum	plastid	75.0	76.22
TraesCS7B01G197000.2	Wheat	mitochondrion, plastid	74.54	75.41
TraesCSU01G135100.2	Wheat	plastid	74.31	75.17
KXG25370	Sorghum	plastid	75.0	75.17
TraesCS7D01G283900.1	Wheat	golgi	73.62	74.48
TraesCSU01G127700.1	Wheat	plastid	66.28	74.29
HORVU7Hr1G060260.5	Barley	plastid	73.62	74.13
TraesCS5A01G549900.1	Wheat	cytosol	66.06	74.04
Solyc03g071590.2.1	Tomato	plastid	76.15	71.09
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi, peroxisome	78.44	70.23
GSMUA_AchrUn_...	Banana	nucleus, peroxisome, plastid	18.12	58.52
KRH69119	Soybean	mitochondrion, nucleus	31.42	41.27
KRH31702	Soybean	endoplasmic reticulum	30.96	41.16
KRH19181	Soybean	endoplasmic reticulum	33.49	39.14

Protein Annotations

KEGG:00020+1.1.1.37	KEGG:00270+1.1.1.37	KEGG:00620+1.1.1.37	KEGG:00620+1.1.1.82	KEGG:00630+1.1.1.37	KEGG:00680+1.1.1.37
KEGG:00710+1.1.1.37	KEGG:00710+1.1.1.82	KEGG:00720+1.1.1.37	MapMan:1.2.12	EntrezGene:100782567	Gene3D:3.40.50.720
Gene3D:3.90.110.10	UniProt:A0A0R0HW29	EMBL:ACUP02006612	EnsemblPlantsGene:GLYMA_10G197700	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016615	GO:GO:0016616	GO:GO:0046554	GO:GO:0055114	InterPro:IPR015955	EnsemblPlants:KRH34668
ProteinID:KRH34668	ProteinID:KRH34668.1	InterPro:Lactate/malate_DH_C	InterPro:Lactate/malate_DH_N	InterPro:Lactate_DH/Glyco_Ohase_4_C	InterPro:Malate_DH_AS
InterPro:Malate_DH_NADP-dep_pln	InterPro:Malate_DH_type2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00056	PFAM:PF02866	ScanProsite:PS00068
PANTHER:PTHR23382	PANTHER:PTHR23382:SF0	MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5392	MetaCyc:PWY-561
MetaCyc:PWY-5690	MetaCyc:PWY-5913	MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7115	MetaCyc:PWY-7117
MetaCyc:PWY-7383	SUPFAM:SSF51735	SUPFAM:SSF56327	TIGRFAMs:TIGR01757	TIGRFAMs:TIGR01759	UniParc:UPI000189DA4E

Description

hypothetical protein

Coordinates

chr10:-:42905294..42911464

Molecular Weight (calculated)

47717.3 Da

IEP (calculated)

6.592

GRAVY (calculated)

-0.151

Length

436 amino acids

Sequence
(BLAST)

001: MAVTQFNPTC SKTHLHSSQL PFLSRTLPRH RHCTIAPLHR TQQARICCSV APNEVQVPAV KTSDPKSKPE CYGVFCLTYD LRAEEETRSW KKLINIAVSG
101: AAGMIANHLL FKLASGEVFG PDQPIALKLL GSERSIQALE GVAMELEDSL FPLLREVSIG IDPYEVFQDA EWALLIGAKP RGPGMERADL LDINGQIYAA
201: QGRALNAVAS RNVKVIVVGN PCNTNALICL KNAPNIPAKN FHALTRLDEN RAKCQLALKA GVFYDKVSNV TIWGNHSTTQ VPDFLNARID GLPVKEVVKD
301: QKWLEEEFTE KVQKRGGALI QKWGRSSAAS TSVSIVDAIR SLVTPTPEGD WFSSGVYSDG NPYGIAEGIV FSMPCRSKGD GDYELVKDVI FDDYLQQRIA
401: KTEAELLAEK RCVAHLTGEG IAVCDLPGDT MLPGEM

Best Arabidopsis Sequence Match ( AT5G58330.2 )
(BLAST)

001: MAMAELSTPK TTSPFLNSSS RLRLSSKLHL SNHFRHLLLP PLHTTTPNSK ISCSVSQNQA PVAVQENGLV KTKKECYGVF CLTYDLKAEE ETRSWKKLIN
101: IAVSGAAGMI SNHLLFKLAS GEVFGPDQPI ALKLLGSERS IQALEGVAME LEDSLFPLLR EVDIGTDPNE VFQDVEWAIL IGAKPRGPGM ERADLLDING
201: QIFAEQGKAL NKAASPNVKV LVVGNPCNTN ALICLKNAPN IPAKNFHALT RLDENRAKCQ LALKAGVFYD KVSNMTIWGN HSTTQVPDFL NARINGLPVK
301: EVITDHKWLE EGFTESVQKR GGLLIQKWGR SSAASTAVSI VDAIKSLVTP TPEGDWFSTG VYTDGNPYGI EEGLVFSMPC RSKGDGDYEL VKDVEIDDYL
401: RQRIAKSEAE LLAEKRCVAH LTGEGIAYCD LGPVDTMLPG EV

Arabidopsis Description

Malate dehydrogenase [NADP], chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.