CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20977	Soybean	cytosol	84.87	96.84
GSMUA_Achr3P23760_001	Banana	cytosol	45.76	67.39
KRH31954	Soybean	cytosol	60.52	66.53
PGSC0003DMT400016081	Potato	nucleus	57.01	66.17
Os05t0407200-01	Rice	nucleus	51.66	60.48
TraesCS1B01G263400.2	Wheat	nucleus	50.74	59.91
TraesCS1A01G255000.1	Wheat	nucleus	50.55	59.83
HORVU1Hr1G060850.2	Barley	cytosol	35.06	59.75
TraesCS1D01G254400.1	Wheat	nucleus	50.37	59.61
GSMUA_Achr10P...	Banana	cytosol	52.95	59.54
KRH71501	Soybean	cytosol	37.45	59.18
Zm00001d010305_P004	Maize	cytosol	50.18	59.13
KXG21980	Sorghum	cytosol	50.0	58.91
Os05t0144100-01	Rice	cytosol, nucleus	35.61	58.66
TraesCS1D01G088200.1	Wheat	nucleus	47.97	55.08
TraesCS1B01G105200.2	Wheat	mitochondrion, nucleus	47.97	55.08
TraesCS1A01G086800.2	Wheat	nucleus	47.79	54.99
TraesCS1B01G083400.1	Wheat	cytosol	47.05	54.26
TraesCS1D01G066000.1	Wheat	cytosol	46.86	54.04
TraesCS1A01G065300.2	Wheat	cytosol	46.49	53.62
HORVU1Hr1G018790.5	Barley	cytosol	48.52	52.6
HORVU0Hr1G000250.10	Barley	cytosol	22.51	52.36
KXG21285	Sorghum	cytosol, mitochondrion, nucleus	45.57	50.82
Zm00001d010892_P013	Maize	plastid	45.94	49.02
Os01t0383700-01	Rice	nucleus	9.23	41.67

Protein Annotations

EntrezGene:100819543	Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A0R0FYP1	EMBL:ACUP02009200	InterPro:DCAF11/LEC14B
InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_15G099700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH11292	ProteinID:KRH11292	ProteinID:KRH11292.1	PFAM:PF00400
PIRSF:PIRSF038135	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19847	PANTHER:PTHR19847:SF15
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006EE06D2	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:7759829..7766053

Molecular Weight (calculated)

60768.4 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.497

Length

542 amino acids

Sequence
(BLAST)

001: MQIEKKPSKA KETKGALTFP FFQYLTFFIL SNFHHKHTHT TAPKTEAKQA KQANQDSPSC SNQRERIMSW LNKNKSTCSD GSANNESSSS GIVGERDNHL
101: DHEIAQLTKL RSSPHELLGR VVPGKMRLPA STVRMLVGRE GNYSGRGRFS SADGCHVLSR YLPTKGPWIV DRMKSRAYVS QFSADGSLLI AGFQGSHIRI
201: YDVDQGWKVK KDISARKLRW TVTDTSLSPD QLYLVYASMS PIIHIVTVGS GTTESIANVT EIHYGLNFSS DNGDDEFGIF SVKFSTDGRE LVAGTSDCSI
301: CVYDLGADKL SLRIPAHQSD VNTVCFADES GHLIFSGSDD SFIKVWDRRC FVAKGQPAGI LMGHLEGITF IDSRGDGRYL ISNGKDQTTK LWDIRKMSSN
401: AINLGLGDDE WDYRWMDYPE YARNLKHPHD QSLATYKGHS VLRTLVRCYF SPSYSTGQKY IYTGSSDSSV YIYDLVSGAQ VAKLDHHEAP VRDCSWHPYY
501: PMMITSAWDG DVVRWEFPGS DEAPASPNKR EGRIHRRNLL YL

Best Arabidopsis Sequence Match ( AT4G03020.1 )
(BLAST)

001: MFFGPSEFDA DEMGYAMSRL EIESDLCDTG KDVCGVGSSS GSHRSSEHLA DLDHEISQVT KLKSSPHQRY SREVPGRHQL PVSTVRMLAG RESNFSGRGR
101: FSAADCCHML SRYLPTKGPW LVDQMDSRAY VSQFSTDGSL FIAGFQGSRI RIYNVEKGWK VQKDILAKSL RWTVTDTSLS PDQRNLVYAS MSPIVHIVDV
201: GSGSTESHAN VTEIHDGLDF SSDEDGGYSF GIFSVKFSTD GREVVAGSSD DSIYVYDLEA NRVSLRTVAH TSDVNTVCFA DESGNLILSG SDDNLCKVWD
301: RRCFIGRDKP AGVLVGHLEG VTFIDSRGDG RYFISNGKDQ TIKLWDIRKM SSSAPARHEV LRNYEWDYRW MDYPTEARDL KHPLDQSVST YKGHSVLRTL
401: IRCYFSPAHS TGQKYIYTGS NDSSVYIYDL VSGDKVAVLK HHSSPVRDCN WHPYYPTLIS SSWDGDLVKW EFPGSGEAPI MSKKRVRRRH FYY

Arabidopsis Description

Putative WD-repeat protein [Source:UniProtKB/TrEMBL;Acc:Q8LPI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.