Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67127 | Canola | mitochondrion | 30.83 | 35.92 |
| TraesCS1A01G065300.2 | Wheat | cytosol | 70.0 | 17.87 |
| TraesCS1D01G066000.1 | Wheat | cytosol | 69.17 | 17.66 |
| TraesCS1B01G083400.1 | Wheat | cytosol | 67.5 | 17.23 |
| Solyc06g008880.2.1 | Tomato | nucleus | 45.0 | 11.39 |
| VIT_07s0104g00900.t01 | Wine grape | cytosol | 45.0 | 11.11 |
| Os05t0407200-01 | Rice | nucleus | 42.5 | 11.02 |
| Bra034178.1-P | Field mustard | cytosol | 45.83 | 10.78 |
| CDY22095 | Canola | cytosol | 45.0 | 10.59 |
| AT4G03020.1 | Thale cress | nucleus | 43.33 | 10.55 |
| KRH20977 | Soybean | cytosol | 40.83 | 10.32 |
| Solyc01g080690.2.1 | Tomato | cytosol | 40.0 | 10.23 |
| Bra000849.1-P | Field mustard | nucleus | 41.67 | 10.2 |
| CDY17974 | Canola | nucleus | 41.67 | 10.18 |
| CDX90908 | Canola | nucleus | 41.67 | 10.18 |
| KRH31954 | Soybean | cytosol | 41.67 | 10.14 |
| PGSC0003DMT400016081 | Potato | nucleus | 39.17 | 10.06 |
| KRH11292 | Soybean | cytosol | 41.67 | 9.23 |
| CDY21934 | Canola | plastid | 46.67 | 5.87 |
| CDX91264 | Canola | cytosol | 11.67 | 3.83 |
| GSMUA_Achr3P23760_001 | Banana | cytosol | 11.67 | 3.8 |
| Os05t0144100-01 | Rice | cytosol, nucleus | 0.83 | 0.3 |
| KRH71501 | Soybean | cytosol | 0.83 | 0.29 |
| HORVU0Hr1G000250.10 | Barley | cytosol | 0.0 | 0.0 |
| CDY72277 | Canola | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0383700-01 | EnsemblPlantsGene:Os01g0383700 | PANTHER:PTHR19847 | PANTHER:PTHR19847:SF15 | ProteinID:BAH91081.1 | ProteinID:BAS72247.1 |
| UniParc:UPI0001B66F69 | UniProt:C7IWT8 | MapMan:35.1 | : | : | : |
Description
OsWD40-14Similar to LEC14B protein. (Os01t0383700-01)
Coordinates
chr1:+:16046692..16056268
Molecular Weight (calculated)
13253.6 Da
IEP (calculated)
8.397
GRAVY (calculated)
-0.618
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MGWKRKTHHG GSCHQQQSCP SHGNELSAID EEVSHLTRLK SEPCERTRAS LHAGKKRHIS TFKLLSGRES NCLGIGRFSS ADCSYALRKH LPVKGPWCVD
101: DMDSEAYISQ FSADGSLLIG
101: DMDSEAYISQ FSADGSLLIG
001: MFFGPSEFDA DEMGYAMSRL EIESDLCDTG KDVCGVGSSS GSHRSSEHLA DLDHEISQVT KLKSSPHQRY SREVPGRHQL PVSTVRMLAG RESNFSGRGR
101: FSAADCCHML SRYLPTKGPW LVDQMDSRAY VSQFSTDGSL FIAGFQGSRI RIYNVEKGWK VQKDILAKSL RWTVTDTSLS PDQRNLVYAS MSPIVHIVDV
201: GSGSTESHAN VTEIHDGLDF SSDEDGGYSF GIFSVKFSTD GREVVAGSSD DSIYVYDLEA NRVSLRTVAH TSDVNTVCFA DESGNLILSG SDDNLCKVWD
301: RRCFIGRDKP AGVLVGHLEG VTFIDSRGDG RYFISNGKDQ TIKLWDIRKM SSSAPARHEV LRNYEWDYRW MDYPTEARDL KHPLDQSVST YKGHSVLRTL
401: IRCYFSPAHS TGQKYIYTGS NDSSVYIYDL VSGDKVAVLK HHSSPVRDCN WHPYYPTLIS SSWDGDLVKW EFPGSGEAPI MSKKRVRRRH FYY
101: FSAADCCHML SRYLPTKGPW LVDQMDSRAY VSQFSTDGSL FIAGFQGSRI RIYNVEKGWK VQKDILAKSL RWTVTDTSLS PDQRNLVYAS MSPIVHIVDV
201: GSGSTESHAN VTEIHDGLDF SSDEDGGYSF GIFSVKFSTD GREVVAGSSD DSIYVYDLEA NRVSLRTVAH TSDVNTVCFA DESGNLILSG SDDNLCKVWD
301: RRCFIGRDKP AGVLVGHLEG VTFIDSRGDG RYFISNGKDQ TIKLWDIRKM SSSAPARHEV LRNYEWDYRW MDYPTEARDL KHPLDQSVST YKGHSVLRTL
401: IRCYFSPAHS TGQKYIYTGS NDSSVYIYDL VSGDKVAVLK HHSSPVRDCN WHPYYPTLIS SSWDGDLVKW EFPGSGEAPI MSKKRVRRRH FYY
Arabidopsis Description
Putative WD-repeat protein [Source:UniProtKB/TrEMBL;Acc:Q8LPI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.