Factsheet for Os01t0761900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0125500-00	Rice	mitochondrion	42.94	24.91
HORVU3Hr1G004860.1	Barley	cytosol	36.2	23.41
TraesCS3B01G033800.1	Wheat	nucleus	36.2	21.53
TraesCS3B01G050900.1	Wheat	cytosol	38.04	21.23
TraesCS3D01G030300.1	Wheat	nucleus	38.04	20.74
TraesCS3D01G031300.1	Wheat	nucleus	34.36	20.44
TraesCS3B01G050100.1	Wheat	cytosol	34.36	20.44
TraesCS3A01G048300.1	Wheat	nucleus	34.36	20.44
TraesCS3B01G050700.1	Wheat	nucleus	34.97	18.57
TraesCS3B01G033700.1	Wheat	nucleus	33.13	18.49
KXG32009	Sorghum	nucleus	31.29	17.23
TraesCS3B01G050200.1	Wheat	nucleus	24.54	16.19
Os01t0125000-00	Rice	nucleus	26.99	12.98
Os01t0124900-00	Rice	cytosol	14.72	12.12
Os05t0152900-00	Rice	nucleus	20.86	8.5
Os05t0152600-00	Rice	mitochondrion	22.7	7.2
Os01t0123800-00	Rice	nucleus	15.34	6.48
Os06t0311300-01	Rice	plasma membrane	9.82	6.4
Os01t0123700-00	Rice	cytosol, mitochondrion, nucleus	11.66	6.29
Os07t0659800-01	Rice	cytosol	10.43	5.63
Os03t0356414-01	Rice	cytosol	9.82	5.32
Os02t0128800-01	Rice	cytosol	9.82	5.19
Os01t0234900-01	Rice	cytoskeleton, nucleus, peroxisome	11.04	5.19
Os05t0238200-01	Rice	cytoskeleton, nucleus, peroxisome	10.43	4.71
Os02t0293400-01	Rice	cytosol, nucleus, peroxisome	9.2	4.3
Os05t0152700-00	Rice	cytosol, extracellular	1.84	3.03

Protein Annotations

MapMan:35.2	UniProt:A0A0P0V8L3	ProteinID:BAS74463.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872	GO:GO:0061630
InterPro:IPR008974	EnsemblPlantsGene:Os01g0761900	EnsemblPlants:Os01t0761900-00	PANTHER:PTHR10315	PANTHER:PTHR10315:SF35	InterPro:SINA-like
SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI000393AEE4	SEG:seg	:	:

Description

TRAF-like domain containing protein. (Os01t0761900-00)

Coordinates

chr1:+:32057155..32058133

Molecular Weight (calculated)

17355.9 Da

IEP (calculated)

8.623

GRAVY (calculated)

-0.066

Length

163 amino acids

Sequence
(BLAST)

001: MEQSAGQRSS VATNATVDLE VLDCTVCCHP LKPPVLQVQE GKRVLRDVDG GHLFLVDVAP AGPAGLAGAV LLLDPHAGAK AKPKFECHVA FHCRATGWRS
101: SSEFPVRSTA LDGGSLPADC YAFVVPRVAH PPATASIIVS VYDVSKKRPR NGDIRQHLKS RVN

Best Arabidopsis Sequence Match ( AT5G37930.1 )
(BLAST)

001: MARFSVCGGD DGEGPSNNNH QSRKRQRLPS IDENEEDAET SDAGSSGEED EDETQNQGMR PESEDRGSTS DDSDREVVIE ERRFGKFVNS QSSSSSKDSP
101: LSVTLLDPDV LDCPICCEPL KIPIFQCDNG HLACTLCCTK VRNRCPSCTL PIGYVRCRAM EKVIEASRVS CLNAKYGCKE STSYGNRFSH EQVCVFTPCS
201: CPILDCHYTG YYKDLNNHVR AEHKDDLISF VWNTRLTISL DLNKKTTILQ EENDGHVIVV QVFRALHAVY VSVSCIAPLT PGVGRLSCRL AKITVDSLLK
301: QGFMVKNIQK VTNEHPEDGF MLIPSYLFSG NDNLNLQIWI GHGRIFVHS

Arabidopsis Description

E3 ubiquitin-protein ligase SINA-like 10 [Source:UniProtKB/Swiss-Prot;Acc:Q84K34]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.