Factsheet for Os03t0356414-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92255	Sorghum	nucleus	93.69	93.38
Zm00001d029203_P002	Maize	cytosol	93.69	93.38
TraesCS4A01G148400.2	Wheat	nucleus	92.03	92.03
TraesCS4D01G164700.1	Wheat	nucleus	91.69	91.69
Os07t0659800-01	Rice	cytosol	91.69	91.39
VIT_13s0139g00150.t01	Wine grape	cytosol, nucleus, plastid	89.37	88.2
KRH13409	Soybean	cytosol	86.05	85.2
PGSC0003DMT400054414	Potato	cytosol	85.38	84.26
GSMUA_Achr3P08700_001	Banana	cytosol	87.71	76.52
Solyc02g069880.2.1	Tomato	cytosol	50.5	75.25
KRH20763	Soybean	nucleus	86.38	74.5
Os02t0128800-01	Rice	cytosol	68.11	66.56
Os02t0293400-01	Rice	cytosol, nucleus, peroxisome	74.09	63.9
Os01t0234900-01	Rice	cytoskeleton, nucleus, peroxisome	71.76	62.25
Os05t0238200-01	Rice	cytoskeleton, nucleus, peroxisome	72.43	60.39
Os01t0123700-00	Rice	cytosol, mitochondrion, nucleus	21.26	21.19
Os06t0311300-01	Rice	plasma membrane	15.61	18.8
Os01t0125000-00	Rice	nucleus	18.94	16.81
Os01t0124900-00	Rice	cytosol	9.97	15.15
Os01t0125500-00	Rice	mitochondrion	13.95	14.95
Os05t0152900-00	Rice	nucleus	19.6	14.75
Os01t0123800-00	Rice	nucleus	15.28	11.92
Os05t0152600-00	Rice	mitochondrion	19.27	11.28
Os01t0761900-00	Rice	cytosol	5.32	9.82
Os05t0152700-00	Rice	cytosol, extracellular	1.33	4.04

Protein Annotations

MapMan:19.2.2.1.5.3.5	Gene3D:2.60.210.10	Gene3D:3.30.40.10	InterPro:7-in-absentia-prot_TRAF-dom	EntrezGene:9266295	ProteinID:ABF96019.1
EMBL:AK058336	ProteinID:BAH92148.1	ProteinID:BAS84239.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006511	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009056	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872	GO:GO:0061630	GO:GO:0080148
InterPro:IPR001841	InterPro:IPR008974	InterPro:IPR013010	InterPro:IPR013083	EnsemblPlantsGene:Os03g0356414	EnsemblPlants:Os03t0356414-01
PFAM:PF03145	PFscan:PS50089	PFscan:PS51081	PANTHER:PTHR10315	PANTHER:PTHR10315:SF37	UniProt:Q10L91
InterPro:SINA-like	SUPFAM:SSF49599	SUPFAM:SSF57850	InterPro:TRAF-like	UniParc:UPI0000DB49FE	RefSeq:XP_015628073.1
RefSeq:XP_015628074.1	RefSeq:XP_015628076.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_SIAH	SEG:seg

Description

drought-induced SINA protein 1, drought induced seven in absentia (SINA) protein 1, drought induced seven in absentia protein 1Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os03t0356414-01)

Coordinates

chr3:-:13633732..13637491

Molecular Weight (calculated)

34076.9 Da

IEP (calculated)

7.586

GRAVY (calculated)

-0.312

Length

301 amino acids

Sequence
(BLAST)

001: MASVTYIDDS GSEVIDPPKT EVLDVTELAG DPVPHSPKPN VVVSSSVREL LECPVCLSAM YPPIHQCSNG HTLCSGCKPR VHNRCPTCRH ELGNIRCLAL
101: EKVAASLELP CKYQNFGCVG IYPYYCKLKH ESQCQYRPYS CPYAGSECTV AGDIPYLVNH LKDDHKVDMH NGCTFNHRYV KSNPHEVENA TWMLTVFSCF
201: GQYFCLHFEA FQLGMAPVYI AFLRFMGDDL EAKNYSYSLE VGGTGRKMIW QGVPRSIRDS HRKVRDSYDG LIIQRNMALF FSGGERKELK LRVTGRIWKE
301: Q

Best Arabidopsis Sequence Match ( AT3G61790.1 )
(BLAST)

001: MDLDSMDCTS TMDVTDDEEI HQDRHSYASV SKHHHTNNNT TNVNAAASGL LPTTTSVHEL LECPVCTNSM YPPIHQCHNG HTLCSTCKAR VHNRCPTCRQ
101: ELGDIRCLAL EKVAESLELP CKHMSLGCPE IFPYYSKLKH ETVCNFRPYS CPYAGSECSV TGDIPFLVAH LRDDHKVDMH SGCTFNHRYV KSNPREVENA
201: TWMLTVFHCF GQYFCLHFEA FQLGMAPVYM AFLRFMGDET EARNYNYSLE VGGYGRKLIW EGTPRSVRDS HRKVRDSHDG LIIQRNMALF FSGGDRKELK
301: LRVTGRIWKE QQQSGEGGGA CIPNLS

Arabidopsis Description

SINAT3E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A178V9V8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.