Factsheet for Os05t0152600-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0152900-00	Rice	nucleus	49.03	63.0
OQU77414	Sorghum	mitochondrion, nucleus	33.66	48.87
TraesCS2A01G446400.1	Wheat	cytosol, nucleus, plastid	24.32	46.47
KXG21322	Sorghum	nucleus	32.88	45.19
OQU77425	Sorghum	nucleus	31.71	43.35
TraesCS1D01G102900.1	Wheat	nucleus	22.37	30.1
Os01t0125500-00	Rice	mitochondrion	15.37	28.11
Os01t0125000-00	Rice	nucleus	17.7	26.84
Os01t0124900-00	Rice	cytosol	9.34	24.24
Os06t0311300-01	Rice	plasma membrane	11.09	22.8
Os01t0761900-00	Rice	cytosol	7.2	22.7
Os01t0123700-00	Rice	cytosol, mitochondrion, nucleus	13.04	22.19
Os03t0356414-01	Rice	cytosol	11.28	19.27
Os05t0152700-00	Rice	cytosol, extracellular	3.7	19.19
Os01t0123800-00	Rice	nucleus	14.2	18.91
Os02t0128800-01	Rice	cytosol	11.28	18.83
Os07t0659800-01	Rice	cytosol	10.89	18.54
Os02t0293400-01	Rice	cytosol, nucleus, peroxisome	12.06	17.77
Os05t0238200-01	Rice	cytoskeleton, nucleus, peroxisome	12.45	17.73
Os01t0234900-01	Rice	cytoskeleton, nucleus, peroxisome	11.87	17.58

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	InterPro:7-in-absentia-prot_TRAF-dom	UniProt:A0A0P0WI58	ProteinID:BAS92326.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0046872	GO:GO:0061630	InterPro:IPR008974	InterPro:IPR013010	InterPro:IPR013083	EnsemblPlantsGene:Os05g0152600
EnsemblPlants:Os05t0152600-00	PFAM:PF03145	PFscan:PS51081	PANTHER:PTHR10315	PANTHER:PTHR10315:SF35	InterPro:SINA-like
SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI000393B15A	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_SIAH	SEG:seg

Description

Seven-in-absentia protein, sina domain containing protein. (Os05t0152600-00)

Coordinates

chr5:+:3036073..3039680

Molecular Weight (calculated)

55362.0 Da

IEP (calculated)

5.997

GRAVY (calculated)

-0.285

Length

514 amino acids

Sequence
(BLAST)

001: MRLARILPMA ASSSSSKRRA MGMAASDQGD TSAHAMKKPR VRVAPDSSAS EDDTDEDHGH DEGDGGEEEE EEEEPDGDGE EESQSYQDPL ESDGDGVDEE
101: ASAGDMAASE PAAPSTRAAV AGVTVEDADA LECGVCFLLL RPPIFQCEVG HVVCAPCRDT LAPAGRCYVC RVAVAGGEYR RCYALERLVD AIRVACPHAA
201: HGCAARPAYH DVEAHRLACP HGPCHCPGER CGFVGSTAAL LDHFAATHNW PCTTNVRARE VFDVRLHDGF NFLVLAPAGR CHVCRVAVAG GEYRRCYALE
301: RLVDAIRVAC PHAAHGCGAT PAYHALDAHR RACPHAPCHC PGERCGFVGS TVALQDHIAA THSWPCTTNV RAGETVSVHL RDGLAFLRVH HHRRRGSATY
401: SDHLIMLNVT REPYGRAVSV LCIRPHAAAE HQVSPPPPPA MQCELLLVSR FGYDGDGGHC RSHYQKSEFL IGCSDLADGL PDREQSFQFM VPRCVVGDDD
501: EGGIQIHVRI IVIN

Best Arabidopsis Sequence Match ( AT1G66650.1 )
(BLAST)

001: MTKLGRRNDG GGKSHRSSTK RQRRTSVSVD DPSPGEEEEK TLVVLTDDSD SEEDDKPLGD VLRTCRKRRV SSPKSVTLPN SNVLECPNCF DPLKKPIFQC
101: NNGHLACFLC CIKLKKRCSF CKLPIGDVRC RAMEKVIKAG LVSCSNAIYG CKQSTTYGNQ LQSHEKVCVF APCSCPIKDC NYIGFYKDLI NHFRATHKVS
201: PGDINSFVFD RPVIFGLDLD SSDKMVIFVE EKQGNLFVVQ GFIGSHGVYA TVSHIAPMVP EVRKFSCSLA RLRPYSTLRL GLEVKNIQKL RSQEEQPQED
301: FLLIPSYMVN GDHMKMEISI GDKNDYTHI

Arabidopsis Description

E3 ubiquitin-protein ligase SINA-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.