Factsheet for Os07t0659800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97677	Sorghum	cytosol	95.03	95.03
Zm00001d022401_P002	Maize	cytosol	95.03	95.03
Os03t0356414-01	Rice	cytosol	91.39	91.69
TraesCS2D01G131700.1	Wheat	cytosol	90.07	90.37
VIT_13s0139g00150.t01	Wine grape	cytosol, nucleus, plastid	88.74	87.87
KRH13409	Soybean	cytosol	86.09	85.53
TraesCS2A01G129000.1	Wheat	plasma membrane	90.07	85.27
PGSC0003DMT400054414	Potato	cytosol	84.44	83.61
TraesCS2B01G151100.1	Wheat	plasma membrane	90.07	77.71
GSMUA_Achr3P08700_001	Banana	cytosol	88.41	77.39
KRH20763	Soybean	nucleus	86.09	74.5
Solyc02g069880.2.1	Tomato	cytosol	49.67	74.26
HORVU2Hr1G022590.1	Barley	nucleus	89.4	71.24
Os02t0128800-01	Rice	cytosol	67.55	66.23
Os01t0234900-01	Rice	cytoskeleton, nucleus, peroxisome	71.19	61.96
Os02t0293400-01	Rice	cytosol, nucleus, peroxisome	71.52	61.89
Os05t0238200-01	Rice	cytoskeleton, nucleus, peroxisome	71.52	59.83
Os01t0123700-00	Rice	cytosol, mitochondrion, nucleus	20.53	20.53
Os06t0311300-01	Rice	plasma membrane	15.23	18.4
Os01t0125000-00	Rice	nucleus	19.21	17.11
Os01t0124900-00	Rice	cytosol	10.26	15.66
Os01t0125500-00	Rice	mitochondrion	13.58	14.59
Os05t0152900-00	Rice	nucleus	19.21	14.5
Os01t0123800-00	Rice	nucleus	15.56	12.18
Os05t0152600-00	Rice	mitochondrion	18.54	10.89
Os01t0761900-00	Rice	cytosol	5.63	10.43
Os05t0152700-00	Rice	cytosol, extracellular	1.32	4.04

Protein Annotations

MapMan:19.2.2.1.5.3.5	Gene3D:2.60.210.10	Gene3D:3.30.40.10	EntrezGene:4344172	InterPro:7-in-absentia-prot_TRAF-dom	EMBL:AK107155
ProteinID:BAC81163.1	ProteinID:BAD30685.1	ProteinID:BAF22442.1	ProteinID:BAT03041.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872
GO:GO:0061630	InterPro:IPR001841	InterPro:IPR008974	InterPro:IPR013010	InterPro:IPR013083	EnsemblPlantsGene:Os07g0659800
EnsemblPlants:Os07t0659800-01	PFAM:PF03145	PFscan:PS50089	PFscan:PS51081	PANTHER:PTHR10315	PANTHER:PTHR10315:SF37
UniProt:Q7XAM5	InterPro:SINA-like	SUPFAM:SSF49599	SUPFAM:SSF57850	InterPro:TRAF-like	UniParc:UPI00001B61DA
RefSeq:XP_015644782.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_SIAH	:	:

Description

Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os07t0659800-01)

Coordinates

chr7:+:27807792..27811531

Molecular Weight (calculated)

34408.1 Da

IEP (calculated)

7.307

GRAVY (calculated)

-0.436

Length

302 amino acids

Sequence
(BLAST)

001: MASVTYLDDA HSEVIDPPKN EEMLDVTELV DDHTQHSPKP NAMVSGNVRE LLECPVCLNA MYPPIHQCSN GHTLCSGCKP RVHNRCPTCR HELGNIRCLA
101: LEKVAASLEL PCKYQNFGCL GIYPYYCKLK HESQCQYRPY TCPYAGSECT VAGDIQYLVS HLKDDHKVDM HNGSTFNHRY VKSNPHEVEN ATWMLTVFSC
201: FGQYFCLHFE AFQLGMAPVY IAFLRFMGDD AEAKNYSYSL EVGGSGRKMT WQGVPRSIRD SHRKVRDSYD GLIIQRNMAL FFSGGDKKEL KLRVTGRIWK
301: EQ

Best Arabidopsis Sequence Match ( AT3G61790.1 )
(BLAST)

001: MDLDSMDCTS TMDVTDDEEI HQDRHSYASV SKHHHTNNNT TNVNAAASGL LPTTTSVHEL LECPVCTNSM YPPIHQCHNG HTLCSTCKAR VHNRCPTCRQ
101: ELGDIRCLAL EKVAESLELP CKHMSLGCPE IFPYYSKLKH ETVCNFRPYS CPYAGSECSV TGDIPFLVAH LRDDHKVDMH SGCTFNHRYV KSNPREVENA
201: TWMLTVFHCF GQYFCLHFEA FQLGMAPVYM AFLRFMGDET EARNYNYSLE VGGYGRKLIW EGTPRSVRDS HRKVRDSHDG LIIQRNMALF FSGGDRKELK
301: LRVTGRIWKE QQQSGEGGGA CIPNLS

Arabidopsis Description

SINAT3E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A178V9V8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.