Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92892 | Soybean | nucleus | 51.76 | 51.52 |
| AT5G27680.2 | Thale cress | nucleus | 48.35 | 47.9 |
| GSMUA_Achr8P06700_001 | Banana | nucleus | 44.94 | 47.75 |
| TraesCS1D01G100000.1 | Wheat | nucleus | 46.59 | 46.81 |
| TraesCS1B01G119200.1 | Wheat | nucleus | 46.59 | 46.81 |
| HORVU1Hr1G021560.16 | Barley | nucleus | 46.35 | 46.57 |
| Bra009948.1-P | Field mustard | nucleus | 50.0 | 46.15 |
| TraesCS1A01G091400.2 | Wheat | nucleus | 46.24 | 45.28 |
| EES19033 | Sorghum | nucleus | 45.76 | 45.02 |
| Zm00001d010866_P004 | Maize | nucleus | 45.76 | 44.82 |
| Os05t0150600-02 | Rice | nucleus | 44.47 | 44.79 |
| Solyc02g088430.1.1 | Tomato | extracellular, mitochondrion, plastid, vacuole | 28.12 | 44.18 |
| CDX80626 | Canola | golgi, mitochondrion | 36.47 | 41.17 |
| Solyc09g018710.2.1 | Tomato | cytosol | 18.82 | 39.02 |
| CDX80633 | Canola | nucleus | 14.47 | 33.24 |
| CDX80627 | Canola | nucleus | 14.47 | 33.06 |
| Solyc08g074610.1.1 | Tomato | nucleus | 17.53 | 27.09 |
| Solyc01g100280.2.1 | Tomato | nucleus | 19.76 | 23.86 |
| Solyc07g042010.2.1 | Tomato | nucleus | 16.59 | 20.58 |
| Solyc05g014690.1.1 | Tomato | nucleus | 17.18 | 14.57 |
| Solyc01g103960.2.1 | Tomato | nucleus | 20.0 | 14.41 |
| Solyc09g018690.2.1 | Tomato | nucleus | 2.59 | 4.34 |
Protein Annotations
Description
No Description!
Coordinates
chr1:+:89702593..89711930
Molecular Weight (calculated)
94826.6 Da
IEP (calculated)
7.664
GRAVY (calculated)
-0.263
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDRVVAEL VGMGFELSDI TDAVEVVGPS IDSAIDYLLD DSRRKTASAS TSTACFTSCA GMLGKRGSSS SSCSAGKIRQ SSINEFIQSE SRPKRSKTIN
101: KLNMSQTEVL QRDTGGQNVH PPLEDSDLHI ATEKAVTSSY CKDEDIGPDW QKKVKALLQK HFGFPLFKDF QKDALEAWLS HQDCLVLAAT GSGKSLCFQI
201: PALLTGKVVI VISPLISLMH DQCLKLAKHG VSACFLGSGQ TDKSVEQKAM AGMYSIIYVC PETILRLIKP LQSLAESRGI ALFAVDEVHC VSKWGHDFRP
301: DYRRLSVLRE SFSMDTMKFL KFDIPIMALT ATATTRVRED ILQSLHMSKA TKIVLTSFFR PNLRFLVKHS KTSSLASYKK DFHELISIYS RKGKSSSKNK
401: LMSTNLVENS ESSDNASNGR MDECNGINEV DVDDVEGYAV SDSDNEVSSP GRYGLDSSKD RQLSVEYLED ECDVVQDVDD LDVSCGEFSG KLPLEGCSGF
501: LLHKTPDLAN DPKERVKLQH KLLEDGPTII YAPTRKETLS ISKFLSKFGI KAAAYNAKLP KSHLRQVHKE FHENTLQVIV ATIAFGMGID KLNVRRIIHY
601: GWPQSLEAYY QEAGRAGRDG KVAECVLYAN LSRTPTLLPS QRSEEQTKQA YKMLSDCFRY GMNTSCCRAK TLVEYFGEHF LLEKCLVCDI CIKGPPERQN
701: LKAEAMIFLQ VLSTHCRNFA DISYGGYEGR LSERPNIKAL VSRIRELYQQ FSASDLLWWR GLARLLEVEG FIREGDDMKH VRCGSLAGSG NKYLESFLIS
801: YYWSNEGSVG LFYIASLEVS LTNIKLVPKS STLCKDYFLK SVMLGRLQRS
101: KLNMSQTEVL QRDTGGQNVH PPLEDSDLHI ATEKAVTSSY CKDEDIGPDW QKKVKALLQK HFGFPLFKDF QKDALEAWLS HQDCLVLAAT GSGKSLCFQI
201: PALLTGKVVI VISPLISLMH DQCLKLAKHG VSACFLGSGQ TDKSVEQKAM AGMYSIIYVC PETILRLIKP LQSLAESRGI ALFAVDEVHC VSKWGHDFRP
301: DYRRLSVLRE SFSMDTMKFL KFDIPIMALT ATATTRVRED ILQSLHMSKA TKIVLTSFFR PNLRFLVKHS KTSSLASYKK DFHELISIYS RKGKSSSKNK
401: LMSTNLVENS ESSDNASNGR MDECNGINEV DVDDVEGYAV SDSDNEVSSP GRYGLDSSKD RQLSVEYLED ECDVVQDVDD LDVSCGEFSG KLPLEGCSGF
501: LLHKTPDLAN DPKERVKLQH KLLEDGPTII YAPTRKETLS ISKFLSKFGI KAAAYNAKLP KSHLRQVHKE FHENTLQVIV ATIAFGMGID KLNVRRIIHY
601: GWPQSLEAYY QEAGRAGRDG KVAECVLYAN LSRTPTLLPS QRSEEQTKQA YKMLSDCFRY GMNTSCCRAK TLVEYFGEHF LLEKCLVCDI CIKGPPERQN
701: LKAEAMIFLQ VLSTHCRNFA DISYGGYEGR LSERPNIKAL VSRIRELYQQ FSASDLLWWR GLARLLEVEG FIREGDDMKH VRCGSLAGSG NKYLESFLIS
801: YYWSNEGSVG LFYIASLEVS LTNIKLVPKS STLCKDYFLK SVMLGRLQRS
001: MDLSSDQLVM KIVEMGFEKL DALEAVKAVG GKSCDDAVEY ILKGNHRTGG FKPASLLCSS GSNKILGKRA MPSSFSSSES KRQSSLLDHF RSVNQNKKKG
101: DTFGTVEVDS QLETVSEHSE EVRKSLAPVF MESSCFPEGQ LLNGCSEASS SWEKRVNSIL RNRFGISSLR SFQREALSTW VAHKDCLVLA ATGSGKSLCF
201: QIPALLTGKV VVVISPLISL MHDQCLKLSR HKVSACFLGS GQLDNCIEEK AMQGMYQIIY VCPETVVRLI KPLQKLAKTH GIALFAIDEA HCVSKWGHDF
301: RPHYRKLSVL RENFCASNLE FLEYDVPIMA LTATATVNVQ EDILESLHLS KETKIVLTSF FRPNLQFSVK HSRTKFASSY AKDFQNLVDL YSEKKNSTGK
401: KLAVISRESE EQTDFGSHDS ENIHETDYDE DEEDQENSLA KKNSSNGKEL SEAYLEDETD IFQSVDDWDV ACGEFCAMPS CELLEIPVPS EKQKDLEGLT
501: IIYVPTRKES VNIAKYLCGV GLKAAAYNAS LPKKHLRQVH QDFHDNKLQV VVATIAFGMG IDKKNVRKII HYGWLQSLEA YYQEAGRAGR DGELAECVLY
601: ADLSRAPTLL PSRRSKEQTE QAYKMLSDCF RYGMNTSQCR AKILVEYFGE EFSSKKCNSC DVCTEGPPEL VDVREEANLL FQVITAFHLQ VDNDSEHAPY
701: EDYGLGNSKQ NKLSHKPNLL FFISKLREQC EKFKETDCLW WKGLARIMEA EGYIKEMDNK DRRVEIKFIQ PTEKGKKQLD FQDDKPLYVY PEADMLLSLK
801: QDRTYSGFSE WGKGWADPEI RRQRLERRER KPRRERKPRK KRTRGRSSTK LHPWRSKE
101: DTFGTVEVDS QLETVSEHSE EVRKSLAPVF MESSCFPEGQ LLNGCSEASS SWEKRVNSIL RNRFGISSLR SFQREALSTW VAHKDCLVLA ATGSGKSLCF
201: QIPALLTGKV VVVISPLISL MHDQCLKLSR HKVSACFLGS GQLDNCIEEK AMQGMYQIIY VCPETVVRLI KPLQKLAKTH GIALFAIDEA HCVSKWGHDF
301: RPHYRKLSVL RENFCASNLE FLEYDVPIMA LTATATVNVQ EDILESLHLS KETKIVLTSF FRPNLQFSVK HSRTKFASSY AKDFQNLVDL YSEKKNSTGK
401: KLAVISRESE EQTDFGSHDS ENIHETDYDE DEEDQENSLA KKNSSNGKEL SEAYLEDETD IFQSVDDWDV ACGEFCAMPS CELLEIPVPS EKQKDLEGLT
501: IIYVPTRKES VNIAKYLCGV GLKAAAYNAS LPKKHLRQVH QDFHDNKLQV VVATIAFGMG IDKKNVRKII HYGWLQSLEA YYQEAGRAGR DGELAECVLY
601: ADLSRAPTLL PSRRSKEQTE QAYKMLSDCF RYGMNTSQCR AKILVEYFGE EFSSKKCNSC DVCTEGPPEL VDVREEANLL FQVITAFHLQ VDNDSEHAPY
701: EDYGLGNSKQ NKLSHKPNLL FFISKLREQC EKFKETDCLW WKGLARIMEA EGYIKEMDNK DRRVEIKFIQ PTEKGKKQLD FQDDKPLYVY PEADMLLSLK
801: QDRTYSGFSE WGKGWADPEI RRQRLERRER KPRRERKPRK KRTRGRSSTK LHPWRSKE
Arabidopsis Description
RECQSIMATP-dependent DNA helicase Q-like SIM [Source:UniProtKB/Swiss-Prot;Acc:Q9FT69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.