Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g07060.t01 | Wine grape | mitochondrion | 15.86 | 36.0 |
| AT5G25780.1 | Thale cress | cytosol | 55.51 | 17.65 |
| AT5G27640.2 | Thale cress | cytosol | 55.51 | 17.07 |
| GSMUA_Achr11P... | Banana | cytosol | 51.54 | 16.86 |
| Os10t0569200-01 | Rice | cytosol, golgi, nucleus, plasma membrane, plastid | 52.42 | 16.55 |
| EER91898 | Sorghum | cytosol | 52.42 | 16.53 |
| Zm00001d030011_P001 | Maize | plasma membrane | 51.98 | 16.39 |
| TraesCS4B01G083200.1 | Wheat | cytosol | 50.66 | 16.31 |
| HORVU5Hr1G106440.1 | Barley | cytosol | 51.54 | 16.23 |
| TraesCS5A01G442500.1 | Wheat | cytosol, golgi | 50.66 | 16.08 |
| TraesCS4A01G232600.1 | Wheat | cytosol | 50.66 | 15.95 |
| TraesCS5D01G449900.2 | Wheat | cytosol, nucleus, unclear | 50.66 | 15.95 |
| TraesCS5B01G446600.1 | Wheat | cytosol | 50.66 | 15.95 |
| HORVU4Hr1G014100.3 | Barley | cytosol | 50.66 | 15.95 |
| Solyc01g088370.2.1 | Tomato | nucleus, plastid | 50.22 | 15.9 |
| PGSC0003DMT400004200 | Potato | cytosol | 50.22 | 15.9 |
| KRH64883 | Soybean | endoplasmic reticulum | 50.22 | 15.88 |
| TraesCS4D01G081300.1 | Wheat | cytosol, nucleus | 50.22 | 15.81 |
| KRH48727 | Soybean | endoplasmic reticulum | 49.34 | 15.6 |
| TraesCS6B01G307400.1 | Wheat | cytosol | 46.7 | 15.41 |
| KRH61614 | Soybean | endoplasmic reticulum | 38.77 | 14.79 |
| TraesCS6D01G406100.1 | Wheat | cytosol | 28.19 | 13.94 |
| HORVU5Hr1G008250.6 | Barley | cytosol, mitochondrion, plastid | 48.9 | 12.5 |
| AT1G73180.1 | Thale cress | cytosol | 15.86 | 7.02 |
| KRH66844 | Soybean | cytosol | 0.88 | 2.56 |
Protein Annotations
| MapMan:35.1 | EntrezGene:841325 | ProteinID:AEE32382.1 | ArrayExpress:AT1G49015 | EnsemblPlantsGene:AT1G49015 | RefSeq:AT1G49015 |
| TAIR:AT1G49015 | RefSeq:AT1G49015-TAIR-G | EnsemblPlants:AT1G49015.1 | TAIR:AT1G49015.1 | Unigene:At.52086 | InterPro:EIF3B |
| UniProt:F4I057 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 |
| GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031369 | RefSeq:NP_564538.1 | PFAM:PF08662 | PANTHER:PTHR14068 |
| SUPFAM:SSF82171 | InterPro:TIF_beta_prop-like | UniParc:UPI00001630B6 | : | : | : |
Description
DPP6 N-terminal domain-like protein [Source:UniProtKB/TrEMBL;Acc:F4I057]
Coordinates
chr1:+:18134528..18135312
Molecular Weight (calculated)
25305.3 Da
IEP (calculated)
8.465
GRAVY (calculated)
-0.164
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVDGHVVD NSWPIIRWAG GKDDKYFATL IKNTTATQEG AAVNFDDVVG MSWSPTEPIL SLLKGDVKNQ PKKVVFLQIP GYVELMHKDI LSVSDCKMYW
101: QSKGKYLAVQ VTRHTCSLFE LFRFNKVQGI TTEALEVDEK ILAFAWEPSG HRFAVIHGDQ SKPNVSFYSM ETPQNPGKVS KLATFDDKEA DALFWSPRGK
201: HIVLAGLKAA SMAISSFSTW ISLRCSR
101: QSKGKYLAVQ VTRHTCSLFE LFRFNKVQGI TTEALEVDEK ILAFAWEPSG HRFAVIHGDQ SKPNVSFYSM ETPQNPGKVS KLATFDDKEA DALFWSPRGK
201: HIVLAGLKAA SMAISSFSTW ISLRCSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.