Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39141 | Canola | mitochondrion | 77.2 | 77.31 |
| CDX82665 | Canola | mitochondrion, plastid | 76.91 | 76.91 |
| Bra038853.1-P | Field mustard | mitochondrion | 76.48 | 76.15 |
| GSMUA_Achr1P01200_001 | Banana | cytosol, mitochondrion | 38.1 | 37.29 |
| AT2G15630.1 | Thale cress | mitochondrion | 23.38 | 25.84 |
| AT4G11690.1 | Thale cress | endoplasmic reticulum | 19.77 | 24.2 |
| AT1G09680.1 | Thale cress | mitochondrion | 18.61 | 21.25 |
| AT5G38730.1 | Thale cress | cytosol | 18.04 | 20.97 |
| AT1G05670.3 | Thale cress | mitochondrion | 22.22 | 20.78 |
| AT5G39710.1 | Thale cress | mitochondrion | 21.79 | 20.21 |
| AT1G09820.1 | Thale cress | mitochondrion, plastid | 17.6 | 20.13 |
| AT2G02150.1 | Thale cress | mitochondrion, plastid | 21.79 | 19.84 |
| AT5G40400.2 | Thale cress | cytosol | 18.76 | 19.09 |
| AT2G32630.1 | Thale cress | mitochondrion, plastid | 17.17 | 19.07 |
| AT4G19890.1 | Thale cress | plastid | 19.19 | 18.97 |
| AT1G22960.1 | Thale cress | mitochondrion | 19.48 | 18.8 |
| AT2G01740.1 | Thale cress | cytosol | 15.15 | 18.78 |
| AT5G01110.2 | Thale cress | cytosol, plastid | 20.06 | 18.36 |
| AT4G26680.1 | Thale cress | mitochondrion | 13.71 | 18.23 |
| AT5G61400.1 | Thale cress | mitochondrion | 17.03 | 18.04 |
| AT2G16880.1 | Thale cress | cytosol | 19.05 | 17.77 |
| AT1G11710.1 | Thale cress | mitochondrion | 16.31 | 17.2 |
| AT2G28050.1 | Thale cress | cytosol, plastid | 11.26 | 16.88 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:816445 | ProteinID:AAC16458.1 | ProteinID:AEC06863.1 | ProteinID:AEC06864.1 |
| EMBL:AK221302 | EMBL:AK229469 | ProteinID:ANM62931.1 | ProteinID:ANM62932.1 | ArrayExpress:AT2G19280 | EnsemblPlantsGene:AT2G19280 |
| RefSeq:AT2G19280 | TAIR:AT2G19280 | RefSeq:AT2G19280-TAIR-G | EnsemblPlants:AT2G19280.1 | TAIR:AT2G19280.1 | Unigene:At.39865 |
| EMBL:BT012576 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_001189552.1 | RefSeq:NP_001325053.1 |
| RefSeq:NP_001325054.1 | RefSeq:NP_179518.1 | PFAM:PF01535 | PFAM:PF13041 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51375 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF325 | InterPro:Pentatricopeptide_repeat | UniProt:Q6NKW7 | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A3490 | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat-containing protein At2g19280 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKW7]
Coordinates
chr2:+:8362427..8366144
Molecular Weight (calculated)
78755.0 Da
IEP (calculated)
8.011
GRAVY (calculated)
0.091
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MWVSIFNLKS SGLNHFCTRT KAFRYFWCRT FSLASLSENN SRFQTDSSRL PYSGSRYYHS SSKHFGEDFV SILKNIDVPR DCVETIRNVL VKHNWIQKYE
101: SGFSTELDQY TVIRILDDLF EETLDASIVL YFFRWSELWI GVEHSSRSIS RMIHILVSGN MNYRAVDMLL CLVKKCSGEE RSLCLVMKDL FETRIDRRVL
201: ETVFSILIDC CIRERKVNMA LKLTYKVDQF GIFPSRGVCI SLLKEILRVH GLELAREFVE HMLSRGRHLN AAVLSLFIRK YCSDGYFDKG WELLMGMKHY
301: GIRPDIVAFT VFIDKLCKAG FLKEATSVLF KLKLFGISQD SVSVSSVIDG FCKVGKPEEA IKLIHSFRLR PNIFVYSSFL SNICSTGDML RASTIFQEIF
401: ELGLLPDCVC YTTMIDGYCN LGRTDKAFQY FGALLKSGNP PSLTTSTILI GACSRFGSIS DAESVFRNMK TEGLKLDVVT YNNLMHGYGK THQLNKVFEL
501: IDEMRSAGIS PDVATYNILI HSMVVRGYID EANEIISELI RRGFVPSTLA FTDVIGGFSK RGDFQEAFIL WFYMADLRMK PDVVTCSALL HGYCKAQRME
601: KAIVLFNKLL DAGLKPDVVL YNTLIHGYCS VGDIEKACEL IGLMVQRGML PNESTHHALV LGLEGKRFVN SETHASMLLE EIIVAKWHLT SGG
101: SGFSTELDQY TVIRILDDLF EETLDASIVL YFFRWSELWI GVEHSSRSIS RMIHILVSGN MNYRAVDMLL CLVKKCSGEE RSLCLVMKDL FETRIDRRVL
201: ETVFSILIDC CIRERKVNMA LKLTYKVDQF GIFPSRGVCI SLLKEILRVH GLELAREFVE HMLSRGRHLN AAVLSLFIRK YCSDGYFDKG WELLMGMKHY
301: GIRPDIVAFT VFIDKLCKAG FLKEATSVLF KLKLFGISQD SVSVSSVIDG FCKVGKPEEA IKLIHSFRLR PNIFVYSSFL SNICSTGDML RASTIFQEIF
401: ELGLLPDCVC YTTMIDGYCN LGRTDKAFQY FGALLKSGNP PSLTTSTILI GACSRFGSIS DAESVFRNMK TEGLKLDVVT YNNLMHGYGK THQLNKVFEL
501: IDEMRSAGIS PDVATYNILI HSMVVRGYID EANEIISELI RRGFVPSTLA FTDVIGGFSK RGDFQEAFIL WFYMADLRMK PDVVTCSALL HGYCKAQRME
601: KAIVLFNKLL DAGLKPDVVL YNTLIHGYCS VGDIEKACEL IGLMVQRGML PNESTHHALV LGLEGKRFVN SETHASMLLE EIIVAKWHLT SGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.