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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47261 Canola plastid 80.97 82.3
Bra015447.1-P Field mustard cytosol 48.18 81.88
CDY10136 Canola cytosol 40.22 81.42
VIT_01s0026g01280.t01 Wine grape mitochondrion, plastid 62.08 61.5
KRG99196 Soybean cytosol 43.45 60.98
KRH45820 Soybean cytosol, mitochondrion, plastid 59.11 59.03
PGSC0003DMT400058276 Potato mitochondrion 55.74 54.92
OQU90004 Sorghum cytosol 30.36 47.37
GSMUA_Achr8P04810_001 Banana mitochondrion 45.21 46.08
TraesCS2D01G229300.1 Wheat mitochondrion 40.76 40.48
TraesCS2B01G273600.1 Wheat plastid 40.22 39.95
Os07t0513200-01 Rice mitochondrion 39.95 39.26
HORVU2Hr1G046710.2 Barley cytosol, plastid 40.62 38.89
Zm00001d006478_P001 Maize mitochondrion 39.0 38.79
TraesCS2A01G223300.1 Wheat mitochondrion, plastid 39.95 38.49
AT5G01110.2 Thale cress cytosol, plastid 28.48 27.87
AT5G39710.1 Thale cress mitochondrion 28.07 27.84
AT2G02150.1 Thale cress mitochondrion, plastid 28.48 27.73
AT4G26680.1 Thale cress mitochondrion 19.3 27.45
AT5G38730.1 Thale cress cytosol 22.0 27.35
AT2G01740.1 Thale cress cytosol 20.11 26.65
AT2G32630.1 Thale cress mitochondrion, plastid 21.86 25.96
AT2G15630.1 Thale cress mitochondrion 21.73 25.68
AT5G61400.1 Thale cress mitochondrion 22.54 25.54
AT1G09820.1 Thale cress mitochondrion, plastid 20.78 25.41
AT4G11690.1 Thale cress endoplasmic reticulum 18.76 24.56
AT1G09680.1 Thale cress mitochondrion 19.97 24.38
AT4G19890.1 Thale cress plastid 22.67 23.97
AT1G22960.1 Thale cress mitochondrion 22.27 22.98
AT1G11710.1 Thale cress mitochondrion 19.84 22.37
AT2G19280.1 Thale cress mitochondrion 20.78 22.22
AT2G16880.1 Thale cress cytosol 21.73 21.67
AT5G40400.2 Thale cress cytosol 19.84 21.59
AT2G28050.1 Thale cress cytosol, plastid 11.07 17.75
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1EntrezGene:837074UniProt:A0A068FPW3UniProt:A0A178WA26ProteinID:AAD30619.1
ProteinID:AEE27873.1ProteinID:AEE27874.1EMBL:AK226740ProteinID:ANM59910.1ArrayExpress:AT1G05670EnsemblPlantsGene:AT1G05670
RefSeq:AT1G05670TAIR:AT1G05670RefSeq:AT1G05670-TAIR-GEnsemblPlants:AT1G05670.3Unigene:At.75295GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005783GO:GO:0005794GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009451
GO:GO:0009987GO:GO:0016740GO:GO:0016787GO:GO:0043231GO:GO:0090305InterPro:IPR002885
InterPro:IPR011990EMBL:KJ676980RefSeq:NP_001154307.2RefSeq:NP_001318929.1RefSeq:NP_172058.2ProteinID:OAP15208.1
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF949
InterPro:Pentatricopeptide_repeatUniProt:Q0WVK7SUPFAM:SSF81901TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI0000DB50C5
SEG:seg:::::
Description
Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
Coordinates
chr1:-:1697587..1701065
Molecular Weight (calculated)
84557.0 Da
IEP (calculated)
8.283
GRAVY (calculated)
-0.082
Length
741 amino acids
Sequence
(BLAST)
001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.