Factsheet for Os07t0513200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90004	Sorghum	cytosol	50.27	79.79
TraesCS2B01G273600.1	Wheat	plastid	78.65	79.49
TraesCS2D01G229300.1	Wheat	mitochondrion	78.51	79.36
Zm00001d006478_P001	Maize	mitochondrion	76.66	77.58
TraesCS2A01G223300.1	Wheat	mitochondrion, plastid	78.12	76.59
HORVU2Hr1G046710.2	Barley	cytosol, plastid	77.98	75.97
KRG99196	Soybean	cytosol	34.88	49.81
GSMUA_Achr8P04810_001	Banana	mitochondrion	47.48	49.24
CDY10136	Canola	cytosol	23.87	49.18
Bra015447.1-P	Field mustard	cytosol	27.19	47.02
VIT_01s0026g01280.t01	Wine grape	mitochondrion, plastid	45.76	46.12
KRH45820	Soybean	cytosol, mitochondrion, plastid	44.7	45.42
PGSC0003DMT400058276	Potato	mitochondrion	41.38	41.49
AT1G05670.3	Thale cress	mitochondrion	39.26	39.95
CDY47261	Canola	plastid	37.93	39.23
Os04t0477200-01	Rice	endoplasmic reticulum	19.1	31.65
Os04t0463300-01	Rice	cytosol	2.92	31.43
Os05t0583950-00	Rice	mitochondrion	15.25	28.05
Os06t0152500-00	Rice	plastid	25.73	27.95
Os06t0565000-00	Rice	mitochondrion	25.33	27.52
Os10t0484300-01	Rice	mitochondrion	20.03	26.12
Os12t0152600-01	Rice	plastid	24.67	25.98
Os03t0165100-00	Rice	cytosol, mitochondrion	24.93	25.82
Os09t0417500-01	Rice	mitochondrion	20.69	25.24
Os11t0607100-01	Rice	mitochondrion	21.88	24.59
Os02t0827900-03	Rice	plastid	18.83	24.48
Os10t0363500-00	Rice	endoplasmic reticulum	16.58	24.41
Os03t0201400-02	Rice	cytosol	23.87	22.61
Os07t0671200-00	Rice	extracellular	16.05	21.96
Os01t0546700-00	Rice	cytosol	17.24	21.81
Os03t0201200-01	Rice	nucleus	1.86	6.01

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4343368	EMBL:AK101410	ProteinID:BAC55770.1	ProteinID:BAD31185.1
ProteinID:BAF21684.1	ProteinID:BAT01732.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os07g0513200	EnsemblPlants:Os07t0513200-01	PFAM:PF12854	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF949	InterPro:Pentatricopeptide_repeat	UniProt:Q84NV9	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000046A4	RefSeq:XP_015646847.1	RefSeq:XP_015646848.1	RefSeq:XP_015646850.1
SEG:seg	:	:	:	:	:

Description

Pentatricopeptide repeat domain containing protein. (Os07t0513200-01);Pentatricopeptide repeat domain containing protein. (Os07t0513200-02);Hypothetical conserved gene. (Os07t0513200-03)

Coordinates

chr7:+:19668382..19683439

Molecular Weight (calculated)

83719.8 Da

IEP (calculated)

7.144

GRAVY (calculated)

-0.077

Length

754 amino acids

Sequence
(BLAST)

001: MLLRRAVAAV AERSSRLSHS RPLLRRAGSA CSSLTTTTTS QHRHGRRRAP PAESNALTTT AAPRPFPDYS PPRPDSPADD DLARRLAAAV LSSPNPGSLP
101: PLPFLPLLRP LHLLLALPLL ASHPHLPTIL LPLLLLFPSG PRPHPHLLQS FAVAAHLAAV RDPGAARAIL VRALRFPSPH RHFVEQFIST YKAFSSDPVS
201: FDLLLLCLPS APLLLRLRQY GISPSPESCN AVLCRLPLDE AVQLFQELPE KNTCSYNILL KALCTAGRIK DAHQLFDEMA SPPDVVTYGI MVHGYCTLSE
301: LETAIKLLSE MAARGLELNP VAYTSVIALL CDEGQVSDAV RVVEDMVMHG VVLDAAVFTT VMSGFCRKGD LAAARNWFDE MQKRGLAADG VTYTALINGL
401: CRAGELKEAE RVLQEMEDKG LDVDAVTYTV LIDGYCKVGK MTEAFLVHNK MVQKRVTPNV VTYTALSDGL CKQGDVCAAN ELLHEMCSKG LELNIFTYNS
501: LINGLCKAGN LEQAMRTMID MDEAGLKPDV YTYTTIIGAL CQSKELDRAH SLLQEMLDKG IKPTIVTYNV LMNGFCMSGR VEGGKRLLEW MLEKNIHPNT
601: TTYNSLMKQY CIEKNMKSTT EIYKGMLSQE VVPNENTYNI LIKGHCKARN MKEALYFHSE MIEKGFRLTA SSYNALIRLL NKKKKFTEAR RLFEKMRKER
701: LTAEPDVYNF YIDLSFNEDN LESTLALCDE LVEVTLVKSI ADTDDDFAEE HICK

Best Arabidopsis Sequence Match ( AT1G05670.3 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.