Factsheet for Os02t0827900-03

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018528_P001	Maize	cytosol	76.55	76.42
EES07796	Sorghum	cytosol, endoplasmic reticulum, extracellular	78.28	75.67
TraesCS6A01G371200.1	Wheat	plastid	77.76	75.54
TraesCS6D01G355100.1	Wheat	plastid	77.59	75.38
TraesCS6B01G408200.1	Wheat	plastid	76.9	74.71
HORVU6Hr1G087430.7	Barley	cytosol	77.76	73.1
GSMUA_Achr1P17710_001	Banana	cytosol	49.48	46.97
VIT_14s0083g00550.t01	Wine grape	cytosol	47.41	46.61
Solyc04g050550.1.1	Tomato	cytosol	44.83	44.22
KRH20741	Soybean	cytosol	44.31	43.78
KRH13392	Soybean	cytosol	43.97	43.44
CDY67116	Canola	cytosol	43.62	42.66
Bra028204.1-P	Field mustard	cytosol	43.28	42.33
CDX74507	Canola	cytosol	43.28	42.33
AT5G38730.1	Thale cress	cytosol	42.59	41.44
Os04t0477200-01	Rice	endoplasmic reticulum	21.9	27.91
Os10t0363500-00	Rice	endoplasmic reticulum	23.28	26.37
Os05t0583950-00	Rice	mitochondrion	17.59	24.88
Os10t0484300-01	Rice	mitochondrion	24.14	24.22
Os07t0671200-00	Rice	extracellular	21.38	22.5
Os01t0546700-00	Rice	cytosol	22.24	21.64
Os06t0152500-00	Rice	plastid	25.52	21.33
Os12t0152600-01	Rice	plastid	25.86	20.95
Os06t0565000-00	Rice	mitochondrion	23.79	19.88
Os03t0201400-02	Rice	cytosol	26.72	19.47
Os11t0607100-01	Rice	mitochondrion	21.9	18.93
Os07t0513200-01	Rice	mitochondrion	24.48	18.83
Os03t0165100-00	Rice	cytosol, mitochondrion	23.62	18.82
Os09t0417500-01	Rice	mitochondrion	19.83	18.61
Os04t0463300-01	Rice	cytosol	1.9	15.71
Os03t0201200-01	Rice	nucleus	1.72	4.29

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:107277343	MapMan:35.1	ProteinID:BAD23061.1	ProteinID:BAS81711.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os02g0827900	EnsemblPlants:Os02t0827900-03	PFAM:PF01535
PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF279	InterPro:Pentatricopeptide_repeat
UniProt:Q6K7Q1	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00003B0522	RefSeq:XP_015625337.1	SEG:seg

Description

Type I Signal Peptidase 1, TYPE I SIGNAL PEPTIDASE 1Similar to Microsomal signal peptidase 21 kDa subunit. (Os02t0827900-01);Hypothetical conserved gene. (Os02t0827900-02);Hypothetical conserved gene. (Os02t0827900-03);Non-protein coding transcript. (Os02t0827900-04)

Coordinates

chr2:-:35572396..35575862

Molecular Weight (calculated)

63976.7 Da

IEP (calculated)

8.865

GRAVY (calculated)

-0.004

Length

580 amino acids

Sequence
(BLAST)

001: MAPPPAGVEA VCAAVIKSTL TQPHNHHHLL AASPSLLAAV LHRLSPLPST ALAFFRSLPP PHPLDASLAL LRLLAPHPRH HPTARSLLRD LSLRHPLSSP
101: LLLPSLLADP HLPSWLLLLL SQSARPHDAL RVFDHMRARE VVPDAHASSA LLTALAKSRM TATARKVFDQ MTRAGVAMNT HVYNAMLHVC LKAGDAALAE
201: SLMTRMDAAG VPLDRFSFNT VIALYCRKGM QYEAMCVRER MENQGVKADV VTWNSLIHGL CKERRVKEAS QLLREMAMAG VAPDHVTYTT LVDGYCRAGD
301: LEEAVKLRGE MEAMGMLPGV ATYNAILRKL CEDGKMKEVN VLLNEMDERK VQADHVTCNT LINAYCKRGD MTSALKVKRR MMESGLQLDQ FTYKALVHGF
401: CKAKELDEAK EALFEMMGAG FSPNYSVLSW IVDGLCNKNN AVAVLAIPDE LMKRGFPPDK AVYRSLIRRL CKKGFIDLAG NVFNEMQGKG LEADCLVYAT
501: LACAYLTAGK PVAALDILNE MAKKQLYITP QIYNCMCTSY ADEKGSLNML WVHAIERGLI TKSVYKVMHQ ARMKSSNPAV

Best Arabidopsis Sequence Match ( AT5G38730.1 )
(BLAST)

001: MVNLLSANRE ALIAQSICAT VLKGNWKNIL KHKVDSGLLK SAITTQVISE LSLFSGYGGP SLSWSFFIWT DSLPSSKHSL QSSWKMILIL TKHKHFKTAH
101: QLLDKLAQRE LLSSPLVLRS LVGGVSEDPE DVSHVFSWLM IYYAKAGMIN DSIVVFEQIR SCGLKPHLQA CTVLLNSLVK QRLTDTVWKI FKKMVKLGVV
201: ANIHVYNVLV HACSKSGDPE KAEKLLSEME EKGVFPDIFT YNTLISVYCK KSMHFEALSV QDRMERSGVA PNIVTYNSFI HGFSREGRMR EATRLFREIK
301: DDVTANHVTY TTLIDGYCRM NDIDEALRLR EVMESRGFSP GVVTYNSILR KLCEDGRIRE ANRLLTEMSG KKIEPDNITC NTLINAYCKI EDMVSAVKVK
401: KKMIESGLKL DMYSYKALIH GFCKVLELEN AKEELFSMIE KGFSPGYATY SWLVDGFYNQ NKQDEITKLL EEFEKRGLCA DVALYRGLIR RICKLEQVDY
501: AKVLFESMEK KGLVGDSVIF TTMAYAYWRT GKVTEASALF DVMYNRRLMV NLKLYKSISA SYAGDNDVLR FFWSHVGDRC LISKSILREM NRSEVL

Arabidopsis Description

Pentatricopeptide repeat-containing protein At5g38730 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKR3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.