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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G360200.1 Wheat mitochondrion 77.67 77.0
Zm00001d023302_P001 Maize mitochondrion 76.51 75.86
TraesCS7D01G362900.1 Wheat mitochondrion 67.15 75.28
TraesCS7B01G267600.1 Wheat mitochondrion 66.14 72.86
HORVU7Hr1G087760.14 Barley cytosol, mitochondrion 71.9 72.21
KXG22891 Sorghum mitochondrion 55.91 66.32
GSMUA_Achr1P06500_001 Banana cytosol 42.65 58.04
VIT_01s0010g01780.t01 Wine grape cytosol 40.06 50.0
CDY17611 Canola cytosol 36.6 42.83
PGSC0003DMT400043863 Potato endoplasmic reticulum, golgi 42.22 38.5
PGSC0003DMT400043860 Potato endoplasmic reticulum, golgi 42.22 38.5
Solyc02g021280.1.1 Tomato endoplasmic reticulum 41.79 38.21
KRH42458 Soybean plastid 40.78 37.68
CDY03072 Canola mitochondrion 39.63 37.36
Bra024831.1-P Field mustard mitochondrion 38.9 36.89
KRH58559 Soybean plastid 30.4 36.01
AT2G02150.1 Thale cress mitochondrion, plastid 39.19 35.74
Os10t0484300-01 Rice mitochondrion 24.5 29.41
Os05t0583950-00 Rice mitochondrion 17.15 29.02
Os04t0477200-01 Rice endoplasmic reticulum 18.88 28.79
Os07t0671200-00 Rice extracellular 21.61 27.22
Os04t0463300-01 Rice cytosol 2.74 27.14
Os06t0152500-00 Rice plastid 26.37 26.37
Os09t0417500-01 Rice mitochondrion 22.62 25.4
Os07t0513200-01 Rice mitochondrion 27.52 25.33
Os12t0152600-01 Rice plastid 25.36 24.58
Os02t0827900-03 Rice plastid 19.88 23.79
Os03t0165100-00 Rice cytosol, mitochondrion 24.64 23.49
Os01t0546700-00 Rice cytosol 19.45 22.65
Os11t0607100-01 Rice mitochondrion 21.76 22.5
Os10t0363500-00 Rice endoplasmic reticulum 16.57 22.46
Os03t0201400-02 Rice cytosol 23.92 20.85
Os03t0201200-01 Rice nucleus 1.59 4.72
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A0P0WXT3ProteinID:BAS98275.1GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009451GO:GO:0009987GO:GO:0016787GO:GO:0043231GO:GO:0090305InterPro:IPR002885
InterPro:IPR011990EnsemblPlantsGene:Os06g0565000EnsemblPlants:Os06t0565000-00PFAM:PF01535PFAM:PF12854PFAM:PF13041
PFAM:PF13812PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF329InterPro:Pentatricopeptide_repeatSUPFAM:SSF81901
TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI000393C44ASEG:seg::
Description
Hypothetical conserved gene. (Os06t0565000-00)
Coordinates
chr6:+:21749812..21755219
Molecular Weight (calculated)
77058.7 Da
IEP (calculated)
7.865
GRAVY (calculated)
0.085
Length
694 amino acids
Sequence
(BLAST)
001: MLLPLPPRRR LLLLIYPRRR PAAAAFSTLP TPPAAAAPIS HRLRLLRSLQ SVPADRLLSH PLPSTAHACL AAHLLARDRL YAHSRRVLSR LVALRRPHLA
101: ASLVDLLHRA ALALGPRRSA LASVVDTLLS VLADRGLLDD AVRAVARVRE LRVPPNTRTC NHILLRLARD RSGRLVRRLF EQLPAPNVFT FNIVIDFLCK
201: EGELAEARSL FSRMKEMGCL PDVVTFNSLI DGYGKCGELD EVEQLVEEMR RSGCKADVVT YNALINCFCK FGRMETAYGY FAAMKREGVM ANVVTFSTFV
301: DAFCKEGLVR EAMKLFAQMR VRGMALNEFT YTCLIDGTCK AGRLDDAIVL LDEMVRQGVP LNVVTYTVLV DGLCKERKVA EAEDVLRMME KAGVRANELL
401: YTTLIHGHFM NKNSEKALGL LSEMKNKGLE LDISLYGALI QGLCNVHKLD EAKSLLTKMD ESGLEPNYII YTTMMDACFK SGKVPEAIAM LQKILDSGFQ
501: PNVITYCALI DGLCKAGSID EAISHFNKMR DLGLDPNVQA YTALVDGLCK NGCLNEAVQL FNEMVHKGMS LDKVVYTALL DGYLKQGNLH DAFALKAKMI
601: DSGLQLDLFC YTCFISGFCN LNMMPEAREV FSEMIGHGIA PDRAVYNCLI SKYQKLGNLE EAISLQDEME RVLPSCTDSD TATDGISTTM LKFF
Best Arabidopsis Sequence Match ( AT2G02150.2 )
(BLAST)
001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
Arabidopsis Description
Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.