Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G360200.1 | Wheat | mitochondrion | 77.67 | 77.0 |
Zm00001d023302_P001 | Maize | mitochondrion | 76.51 | 75.86 |
TraesCS7D01G362900.1 | Wheat | mitochondrion | 67.15 | 75.28 |
TraesCS7B01G267600.1 | Wheat | mitochondrion | 66.14 | 72.86 |
HORVU7Hr1G087760.14 | Barley | cytosol, mitochondrion | 71.9 | 72.21 |
KXG22891 | Sorghum | mitochondrion | 55.91 | 66.32 |
GSMUA_Achr1P06500_001 | Banana | cytosol | 42.65 | 58.04 |
VIT_01s0010g01780.t01 | Wine grape | cytosol | 40.06 | 50.0 |
CDY17611 | Canola | cytosol | 36.6 | 42.83 |
PGSC0003DMT400043863 | Potato | endoplasmic reticulum, golgi | 42.22 | 38.5 |
PGSC0003DMT400043860 | Potato | endoplasmic reticulum, golgi | 42.22 | 38.5 |
Solyc02g021280.1.1 | Tomato | endoplasmic reticulum | 41.79 | 38.21 |
KRH42458 | Soybean | plastid | 40.78 | 37.68 |
CDY03072 | Canola | mitochondrion | 39.63 | 37.36 |
Bra024831.1-P | Field mustard | mitochondrion | 38.9 | 36.89 |
KRH58559 | Soybean | plastid | 30.4 | 36.01 |
AT2G02150.1 | Thale cress | mitochondrion, plastid | 39.19 | 35.74 |
Os10t0484300-01 | Rice | mitochondrion | 24.5 | 29.41 |
Os05t0583950-00 | Rice | mitochondrion | 17.15 | 29.02 |
Os04t0477200-01 | Rice | endoplasmic reticulum | 18.88 | 28.79 |
Os07t0671200-00 | Rice | extracellular | 21.61 | 27.22 |
Os04t0463300-01 | Rice | cytosol | 2.74 | 27.14 |
Os06t0152500-00 | Rice | plastid | 26.37 | 26.37 |
Os09t0417500-01 | Rice | mitochondrion | 22.62 | 25.4 |
Os07t0513200-01 | Rice | mitochondrion | 27.52 | 25.33 |
Os12t0152600-01 | Rice | plastid | 25.36 | 24.58 |
Os02t0827900-03 | Rice | plastid | 19.88 | 23.79 |
Os03t0165100-00 | Rice | cytosol, mitochondrion | 24.64 | 23.49 |
Os01t0546700-00 | Rice | cytosol | 19.45 | 22.65 |
Os11t0607100-01 | Rice | mitochondrion | 21.76 | 22.5 |
Os10t0363500-00 | Rice | endoplasmic reticulum | 16.57 | 22.46 |
Os03t0201400-02 | Rice | cytosol | 23.92 | 20.85 |
Os03t0201200-01 | Rice | nucleus | 1.59 | 4.72 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A0P0WXT3 | ProteinID:BAS98275.1 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 |
InterPro:IPR011990 | EnsemblPlantsGene:Os06g0565000 | EnsemblPlants:Os06t0565000-00 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 |
PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF329 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 |
TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000393C44A | SEG:seg | : | : |
Description
Hypothetical conserved gene. (Os06t0565000-00)
Coordinates
chr6:+:21749812..21755219
Molecular Weight (calculated)
77058.7 Da
IEP (calculated)
7.865
GRAVY (calculated)
0.085
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPLPPRRR LLLLIYPRRR PAAAAFSTLP TPPAAAAPIS HRLRLLRSLQ SVPADRLLSH PLPSTAHACL AAHLLARDRL YAHSRRVLSR LVALRRPHLA
101: ASLVDLLHRA ALALGPRRSA LASVVDTLLS VLADRGLLDD AVRAVARVRE LRVPPNTRTC NHILLRLARD RSGRLVRRLF EQLPAPNVFT FNIVIDFLCK
201: EGELAEARSL FSRMKEMGCL PDVVTFNSLI DGYGKCGELD EVEQLVEEMR RSGCKADVVT YNALINCFCK FGRMETAYGY FAAMKREGVM ANVVTFSTFV
301: DAFCKEGLVR EAMKLFAQMR VRGMALNEFT YTCLIDGTCK AGRLDDAIVL LDEMVRQGVP LNVVTYTVLV DGLCKERKVA EAEDVLRMME KAGVRANELL
401: YTTLIHGHFM NKNSEKALGL LSEMKNKGLE LDISLYGALI QGLCNVHKLD EAKSLLTKMD ESGLEPNYII YTTMMDACFK SGKVPEAIAM LQKILDSGFQ
501: PNVITYCALI DGLCKAGSID EAISHFNKMR DLGLDPNVQA YTALVDGLCK NGCLNEAVQL FNEMVHKGMS LDKVVYTALL DGYLKQGNLH DAFALKAKMI
601: DSGLQLDLFC YTCFISGFCN LNMMPEAREV FSEMIGHGIA PDRAVYNCLI SKYQKLGNLE EAISLQDEME RVLPSCTDSD TATDGISTTM LKFF
101: ASLVDLLHRA ALALGPRRSA LASVVDTLLS VLADRGLLDD AVRAVARVRE LRVPPNTRTC NHILLRLARD RSGRLVRRLF EQLPAPNVFT FNIVIDFLCK
201: EGELAEARSL FSRMKEMGCL PDVVTFNSLI DGYGKCGELD EVEQLVEEMR RSGCKADVVT YNALINCFCK FGRMETAYGY FAAMKREGVM ANVVTFSTFV
301: DAFCKEGLVR EAMKLFAQMR VRGMALNEFT YTCLIDGTCK AGRLDDAIVL LDEMVRQGVP LNVVTYTVLV DGLCKERKVA EAEDVLRMME KAGVRANELL
401: YTTLIHGHFM NKNSEKALGL LSEMKNKGLE LDISLYGALI QGLCNVHKLD EAKSLLTKMD ESGLEPNYII YTTMMDACFK SGKVPEAIAM LQKILDSGFQ
501: PNVITYCALI DGLCKAGSID EAISHFNKMR DLGLDPNVQA YTALVDGLCK NGCLNEAVQL FNEMVHKGMS LDKVVYTALL DGYLKQGNLH DAFALKAKMI
601: DSGLQLDLFC YTCFISGFCN LNMMPEAREV FSEMIGHGIA PDRAVYNCLI SKYQKLGNLE EAISLQDEME RVLPSCTDSD TATDGISTTM LKFF
001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
Arabidopsis Description
Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.