Factsheet for TraesCS7D01G362900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G267600.1	Wheat	mitochondrion	94.35	92.7
TraesCS7A01G360200.1	Wheat	mitochondrion	90.79	80.29
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	84.49	75.69
Os06t0565000-00	Rice	mitochondrion	75.28	67.15
Zm00001d023302_P001	Maize	mitochondrion	74.15	65.57
KXG22891	Sorghum	mitochondrion	60.26	63.76
GSMUA_Achr1P06500_001	Banana	cytosol	39.26	47.65
VIT_01s0010g01780.t01	Wine grape	cytosol	38.45	42.81
CDY17611	Canola	cytosol	35.22	36.76
PGSC0003DMT400043860	Potato	endoplasmic reticulum, golgi	41.68	33.9
PGSC0003DMT400043863	Potato	endoplasmic reticulum, golgi	41.68	33.9
Solyc02g021280.1.1	Tomato	endoplasmic reticulum	41.36	33.73
KRH42458	Soybean	plastid	40.71	33.56
CDY03072	Canola	mitochondrion	38.61	32.47
AT2G02150.1	Thale cress	mitochondrion, plastid	39.9	32.46
Bra024831.1-P	Field mustard	mitochondrion	37.96	32.1
KRH58559	Soybean	plastid	30.37	32.08
TraesCS3D01G353400.1	Wheat	cytosol	16.64	25.12
TraesCS2D01G336100.1	Wheat	plastid	20.84	24.62
TraesCS1D01G157200.1	Wheat	mitochondrion	22.62	24.39
TraesCS4D01G279000.1	Wheat	mitochondrion	25.04	23.88
TraesCS2D01G115600.1	Wheat	cytosol, plastid	22.13	23.42
TraesCS5D01G136000.1	Wheat	plastid	24.39	22.47
TraesCS7D01G103900.1	Wheat	plastid	25.2	22.45
TraesCS2D01G326200.1	Wheat	mitochondrion	21.97	22.33
TraesCS2D01G229300.1	Wheat	mitochondrion	25.04	20.78
TraesCS5D01G237900.1	Wheat	plastid	22.13	20.69
TraesCS6D01G355100.1	Wheat	plastid	19.71	20.44
TraesCS2D01G324100.1	Wheat	plastid	16.48	20.32
TraesCS7D01G134400.2	Wheat	mitochondrion	20.68	19.1
TraesCS3D01G203500.2	Wheat	cytosol, mitochondrion	17.29	18.67
TraesCS4D01G259600.1	Wheat	cytosol	23.1	18.12

Protein Annotations

EnsemblPlants:TraesCS7D01G362900.1	EnsemblPlantsGene:TraesCS7D01G362900	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF329	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756	MapMan:35.1

Description

No Description!

Coordinates

chr7D:-:466057544..466059828

Molecular Weight (calculated)

65871.6 Da

IEP (calculated)

7.261

GRAVY (calculated)

0.077

Length

619 amino acids

Sequence
(BLAST)

001: MLPLPLRRHL LFMYSRRNPS FIPFSIAATA ISTLPTDSAA AAAATPISDR LRLLHSLXXX XXXXXXXXXX XXXXXXXIAA HLLARARLFP HSRSLLSRLL
101: APGHRPHLAA SLVDLLHRAA PALGPRRSAL PSVVDTLLSL LADRGFLDDA VLALGRVREL RVPPNTRTCN HILLRLARER RGPLVRRLFE QVPAPNVFTF
201: NIVIDFLCKE GELAEARALF SRMKAIGCLP DVVTYNSLID GCGKCGELEE VEQLVGEMRG CGCTPDVVTY NALVNCFCKF GRMERAYSYF AEMKREGVMA
301: NIRTYSTFVD AFCKKGMVRE AMKLFAQMRI KGMTPNEVTY TCLVDGTFKA GRLDDAFVLI DEMVQQGVPL NVVTYTVQVD GLCKEGKIAE AEDVFRLMEK
401: AGVKANELLY TTLIHGHFMN KNKVKESEAI ALLHKMQDSG FQLNVVTYCA LVDGLCKAGS VDEAVSHFNK MRDLGLEPNV HTYTALIDGL CKNGCLTKAV
501: ALLDEMAGKG LSLDKVVYTS LMDGYLKQGN LQDAFALKAE MINSGLQLDL YGYTCFVWGF CNLNMMQEAR EVLSEMIGNG ITPDTQKLGH IEEAASLQNE
601: MESVLPSCTI GDAAPGSDG

Best Arabidopsis Sequence Match ( AT2G02150.2 )
(BLAST)

001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.