Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024831.1-P | Field mustard | mitochondrion | 97.47 | 78.96 |
| CDY03072 | Canola | mitochondrion | 95.62 | 77.04 |
| AT2G02150.1 | Thale cress | mitochondrion, plastid | 85.16 | 66.36 |
| VIT_01s0010g01780.t01 | Wine grape | cytosol | 55.65 | 59.35 |
| GSMUA_Achr1P06500_001 | Banana | cytosol | 43.0 | 50.0 |
| KRH42458 | Soybean | plastid | 57.17 | 45.14 |
| KRH58559 | Soybean | plastid | 40.81 | 41.3 |
| PGSC0003DMT400043863 | Potato | endoplasmic reticulum, golgi | 51.26 | 39.95 |
| PGSC0003DMT400043860 | Potato | endoplasmic reticulum, golgi | 51.26 | 39.95 |
| Solyc02g021280.1.1 | Tomato | endoplasmic reticulum | 51.1 | 39.92 |
| HORVU7Hr1G087760.14 | Barley | cytosol, mitochondrion | 42.83 | 36.76 |
| Os06t0565000-00 | Rice | mitochondrion | 42.83 | 36.6 |
| Zm00001d023302_P001 | Maize | mitochondrion | 42.66 | 36.14 |
| TraesCS7A01G360200.1 | Wheat | mitochondrion | 42.5 | 36.0 |
| TraesCS7D01G362900.1 | Wheat | mitochondrion | 36.76 | 35.22 |
| TraesCS7B01G267600.1 | Wheat | mitochondrion | 37.27 | 35.08 |
| CDY10136 | Canola | cytosol | 19.56 | 31.69 |
| KXG22891 | Sorghum | mitochondrion | 28.5 | 28.89 |
| CDY51888 | Canola | cytosol, mitochondrion, plastid | 23.44 | 28.14 |
| CDX78962 | Canola | cytosol | 23.27 | 27.88 |
| CDY04100 | Canola | plastid | 20.24 | 26.14 |
| CDY17453 | Canola | mitochondrion | 20.07 | 25.93 |
| CDY47261 | Canola | plastid | 30.86 | 25.1 |
| CDY30265 | Canola | mitochondrion | 29.51 | 23.97 |
| CDX93473 | Canola | mitochondrion | 24.45 | 23.69 |
| CDX74435 | Canola | mitochondrion | 29.17 | 23.22 |
| CDX94295 | Canola | cytosol | 6.91 | 23.16 |
| CDX94941 | Canola | cytosol, plastid | 23.95 | 23.09 |
| CDX86757 | Canola | endoplasmic reticulum, extracellular | 22.26 | 22.96 |
| CDX87212 | Canola | plastid | 24.62 | 22.78 |
| CDY57780 | Canola | endoplasmic reticulum | 21.92 | 22.61 |
| CDY21405 | Canola | cytosol | 16.02 | 22.46 |
| CDX93490 | Canola | mitochondrion | 22.6 | 22.33 |
| CDY36644 | Canola | mitochondrion | 23.61 | 22.12 |
| CDX94959 | Canola | mitochondrion | 22.43 | 21.88 |
| CDX71231 | Canola | mitochondrion | 23.27 | 21.87 |
| CDY04764 | Canola | cytosol | 12.82 | 21.47 |
| CDX79463 | Canola | plastid | 22.09 | 21.23 |
| CDX84733 | Canola | plastid | 21.92 | 21.17 |
| CDX74507 | Canola | cytosol | 20.74 | 20.74 |
| CDY11211 | Canola | mitochondrion | 25.63 | 20.51 |
| CDY31404 | Canola | cytosol | 25.46 | 20.38 |
| CDY67116 | Canola | cytosol | 20.24 | 20.24 |
| CDY49798 | Canola | mitochondrion | 21.92 | 20.03 |
| CDX71311 | Canola | cytosol | 23.44 | 19.89 |
| CDY04754 | Canola | cytosol | 8.09 | 19.83 |
| CDX80791 | Canola | mitochondrion | 20.07 | 19.8 |
| CDX94298 | Canola | mitochondrion | 18.38 | 19.16 |
| CDY42586 | Canola | plastid | 19.9 | 19.03 |
| CDY50117 | Canola | plastid | 19.9 | 18.94 |
| CDY39141 | Canola | mitochondrion | 21.25 | 18.21 |
| CDX82665 | Canola | mitochondrion, plastid | 21.25 | 18.18 |
| CDY04753 | Canola | mitochondrion, plastid | 12.14 | 17.31 |
| CDX89313 | Canola | mitochondrion | 23.1 | 10.13 |
Protein Annotations
| EnsemblPlants:CDY17611 | EnsemblPlantsGene:GSBRNA2T00001818001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF329 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFscan:PS51375 | ProteinID:CDY17611 | ProteinID:CDY17611.1 |
| SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | UniParc:UPI0004EE7536 | UniProt:A0A078FX76 | MapMan:35.1 | : |
Description
BnaA06g34300DBnaA06g34300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FX76]
Coordinates
chrLK032076:+:89943..91724
Molecular Weight (calculated)
66051.9 Da
IEP (calculated)
4.780
GRAVY (calculated)
0.057
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTLHNCDAF DALWSTRNVC VPGFGVFDAL FSVLIDLDMV EEALQCFSKM KRCRVFPKTR SCNGLLQRFG KLGKREGMKR FFKDMIGAGS KPSVFTYNIM
101: IDCMFKEGDV EAARGLFEEM KFRGLVPDTV TYNSMIDGYG KVGLLDDAVC VFEEMKCMSI EADVITFNSL INCFCKNGVL PKGLGFYREM KRSGVKPNVV
201: TYSTLVDGFC KEGMMEQALK FYVDMRRVGL VPNEFTYTSL IDAKCKIGNL TDAFRLGDEM LEAGVDWNVV TYTALIDGLC DAERMQEAEE LFGKMVAAGV
301: VPNLASYNAL IHGFVKAKNM ERALELLNEL KGRGIKPDLL LYGTFIWGLC GVEKIEGAKV VVKEMQEDGI KANTLIYTTL MDAYFKSGNP KEGLHLLEEM
401: LQLDIDVTVV TFCVLIDGLC KNKLVSKAID YFGRMSEEFG LQANAAVYTA MIDGLCKENQ VDAATSLFEK MAQEGLVPDR TAYTSLMDGN LKQGNVLEAL
501: ALRDKMAEIG MKLDLLAYTS LVWGLSQCNQ LQKARSFLEE MIGEGIVPDE VLCVSVLKKH YELGCVDEAV ELQGYLMKHQ LLTSDKNNAL PDM
101: IDCMFKEGDV EAARGLFEEM KFRGLVPDTV TYNSMIDGYG KVGLLDDAVC VFEEMKCMSI EADVITFNSL INCFCKNGVL PKGLGFYREM KRSGVKPNVV
201: TYSTLVDGFC KEGMMEQALK FYVDMRRVGL VPNEFTYTSL IDAKCKIGNL TDAFRLGDEM LEAGVDWNVV TYTALIDGLC DAERMQEAEE LFGKMVAAGV
301: VPNLASYNAL IHGFVKAKNM ERALELLNEL KGRGIKPDLL LYGTFIWGLC GVEKIEGAKV VVKEMQEDGI KANTLIYTTL MDAYFKSGNP KEGLHLLEEM
401: LQLDIDVTVV TFCVLIDGLC KNKLVSKAID YFGRMSEEFG LQANAAVYTA MIDGLCKENQ VDAATSLFEK MAQEGLVPDR TAYTSLMDGN LKQGNVLEAL
501: ALRDKMAEIG MKLDLLAYTS LVWGLSQCNQ LQKARSFLEE MIGEGIVPDE VLCVSVLKKH YELGCVDEAV ELQGYLMKHQ LLTSDKNNAL PDM
001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
Arabidopsis Description
Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.