CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42458	Soybean	plastid	89.76	70.04
VIT_01s0010g01780.t01	Wine grape	cytosol	40.27	42.45
AT2G02150.1	Thale cress	mitochondrion, plastid	54.95	42.31
Bra024831.1-P	Field mustard	mitochondrion	51.37	41.12
CDY03072	Canola	mitochondrion	51.54	41.03
CDY17611	Canola	cytosol	41.3	40.81
Solyc02g021280.1.1	Tomato	endoplasmic reticulum	47.61	36.76
PGSC0003DMT400043863	Potato	endoplasmic reticulum, golgi	47.61	36.66
PGSC0003DMT400043860	Potato	endoplasmic reticulum, golgi	47.61	36.66
GSMUA_Achr1P06500_001	Banana	cytosol	29.01	33.33
TraesCS7A01G360200.1	Wheat	mitochondrion	37.03	31.0
Os06t0565000-00	Rice	mitochondrion	36.01	30.4
TraesCS7D01G362900.1	Wheat	mitochondrion	32.08	30.37
Zm00001d023302_P001	Maize	mitochondrion	36.01	30.14
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	34.98	29.67
TraesCS7B01G267600.1	Wheat	mitochondrion	31.57	29.37
KRH29553	Soybean	mitochondrion	17.92	23.97
KRH24548	Soybean	mitochondrion	25.09	23.6
KXG22891	Sorghum	mitochondrion	22.87	22.91
KRG99196	Soybean	cytosol	20.48	22.73
KRH33556	Soybean	cytosol	7.85	22.01
KRH29211	Soybean	cytosol	21.84	21.96
KRH45820	Soybean	cytosol, mitochondrion, plastid	27.47	21.7
KRH50360	Soybean	cytosol, extracellular, plastid	20.14	21.22
KRH72966	Soybean	mitochondrion	22.18	21.14
KRH51875	Soybean	cytosol	20.48	21.13
KRH02112	Soybean	extracellular, mitochondrion	19.11	20.66
KRH17313	Soybean	mitochondrion	16.55	20.34
KRH51037	Soybean	endoplasmic reticulum, extracellular, plastid	15.87	20.04
KRH54581	Soybean	mitochondrion	18.09	19.92
KRH20741	Soybean	cytosol	19.8	19.76
KRG90304	Soybean	cytosol	18.77	19.61
KRH13392	Soybean	cytosol	19.28	19.25
KRH16451	Soybean	plastid	22.53	19.21
KRH18049	Soybean	plastid	22.53	19.21
KRH14574	Soybean	plastid	20.31	18.59
KRH56553	Soybean	plastid	19.8	18.53
KRG89236	Soybean	plastid	24.4	18.38
KRH44246	Soybean	cytosol	15.53	18.24
KRH34922	Soybean	cytosol	13.65	17.43
KRH40170	Soybean	mitochondrion	20.31	17.17
KRH49758	Soybean	plastid	18.6	15.48
KRG93154	Soybean	plastid	21.67	13.3

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0R0K537	EMBL:ACUP02003269	EnsemblPlantsGene:GLYMA_05G135600	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:KRH58559	ProteinID:KRH58559	ProteinID:KRH58559.1	PFAM:PF13041
PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF329	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0006EDD160	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:32789912..32791878

Molecular Weight (calculated)

66103.5 Da

IEP (calculated)

5.199

GRAVY (calculated)

0.054

Length

586 amino acids

Sequence
(BLAST)

001: MLLFARNIGS RASLRVSSFH SSPLQNPFPL FFTPSSLSSQ NSIFARPMIW FASFLCVMRY PFVSKPSFDD IASESMRSFL QQDRPHLFDS ALVPIWVSKD
101: LLNLKGDPKS ALKFFKEAGA RAGFRHAAES YCVLAHILFC GMFYLDARSV IKEWILLGRE FPGCDFFDML WSTRNVCRPG FGVFDTLFSV LVDLGMLEEA
201: KAMLLEEEQV HGSAKIFTYN IVIGCLAREG GIETARSLFE EMKALGLRPD IVTYNPLIYG YGKVGMLTGA VTVFEEMKDA GCEPDVITYN SLINLKEFLK
301: LLSMILEANK FFVDMIHVGL QPNEFTYTSL IDANCKIGDL NEAFKLESEM QQAGVNLNIV TYTALLDGLC EDGRMREAEE LFGALLKAEW TLNQQIYTSL
401: FHGYIKAKMM EKEINKKNFK PDLLLYGTKI WDFCRQNKIE DSMAVIREMM DFGLIANSYI YTTLMDAYFK VGKTTEAVNL LQEMQDLGIK ITVVTYGALI
501: DGLCKKGLAQ QAVSYFDHMT RTGLQPNIMI YTALIDGLCK NDCVEEAKNL FNEMLDKGIS PDKLIYTSLI DGNMKHGNPG EAEFAK

Best Arabidopsis Sequence Match ( AT2G02150.1 )
(BLAST)

001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.