CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24548	Soybean	mitochondrion	90.41	63.56
VIT_12s0055g00970.t01	Wine grape	plastid	61.42	42.43
Solyc01g109060.2.1	Tomato	mitochondrion	54.79	38.84
PGSC0003DMT400066731	Potato	mitochondrion, plastid	53.42	37.86
GSMUA_Achr8P16100_001	Banana	cytosol	23.29	37.36
AT2G15630.1	Thale cress	mitochondrion	51.6	36.04
Bra015229.1-P	Field mustard	mitochondrion	51.83	35.86
CDY36644	Canola	mitochondrion	51.83	35.86
CDX71231	Canola	mitochondrion	50.68	35.18
OQU81794	Sorghum	mitochondrion, peroxisome	29.0	31.51
Os04t0477200-01	Rice	endoplasmic reticulum	30.37	29.23
TraesCS2D01G336100.1	Wheat	plastid	34.93	29.2
TraesCS2A01G326700.1	Wheat	plastid	34.93	29.2
TraesCS2B01G355200.1	Wheat	plastid	34.7	29.01
HORVU2Hr1G082620.1	Barley	plastid	33.1	28.66
Zm00001d003294_P001	Maize	plastid	33.56	28.05
KRH50360	Soybean	cytosol, extracellular, plastid	23.29	18.35
KRH51037	Soybean	endoplasmic reticulum, extracellular, plastid	19.41	18.32
KRH51875	Soybean	cytosol	23.52	18.13
KRH29211	Soybean	cytosol	23.97	18.01
KRH58559	Soybean	plastid	23.97	17.92
KRH17313	Soybean	mitochondrion	19.18	17.61
KRH02112	Soybean	extracellular, mitochondrion	21.69	17.53
KRH44246	Soybean	cytosol	19.86	17.43
KRH72966	Soybean	mitochondrion	23.97	17.07
KRH14574	Soybean	plastid	23.06	15.78
KRH54581	Soybean	mitochondrion	18.95	15.6
KRH42458	Soybean	plastid	26.71	15.58
KRH16451	Soybean	plastid	24.43	15.57
KRH34922	Soybean	cytosol	16.21	15.47
KRH18049	Soybean	plastid	23.97	15.28
KRH45820	Soybean	cytosol, mitochondrion, plastid	25.34	14.96
KRH56553	Soybean	plastid	21.0	14.7
KRG90304	Soybean	cytosol	18.49	14.44
KRH33556	Soybean	cytosol	6.85	14.35
KRH20741	Soybean	cytosol	18.49	13.8
KRG99196	Soybean	cytosol	16.44	13.64
KRH13392	Soybean	cytosol	18.26	13.63
KRG89236	Soybean	plastid	23.74	13.37
KRH40170	Soybean	mitochondrion	20.78	13.13
KRH49758	Soybean	plastid	17.35	10.8
KRG93154	Soybean	plastid	23.06	10.58

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EMBL:ACUP02006806	EnsemblPlantsGene:GLYMA_11G123700	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885
InterPro:IPR011990	UniProt:K7LPC6	EnsemblPlants:KRH29553	ProteinID:KRH29553	ProteinID:KRH29553.1	PFAM:PF01535
PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF918	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000294B28C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:9413721..9415448

Molecular Weight (calculated)

50003.5 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.114

Length

438 amino acids

Sequence
(BLAST)

001: MKFLKIFISK PFKLRTFNSL SHSQTPPFSI PTTLLLSIES SQWHFIEQVA PHLTPSLLSS TLTTLRRNPQ LVLHLLSHLH NHPLSLVVCV LYRLPSPKPS
101: INLLQRLILS STATNRTIFN ELALARDRVD VKTTLIFDLL ALECFYFMKE NGFVPNVETC NQMLSLFLKL NRTQMAWVLY AEVFRINIRS MCKEGKLKKV
201: KEFIGHCLRG KFQRARRIFQ TMIDKGLEPD CLRFCLKDEM ISKGIMASLV TYNLFIHALF MEGRMGEADN MIKEMGEKGM MPDVVTNNIL INGYCRCGDA
301: KRAFGLFDEM VGKGIQPTLG YCREGKVEEA RLLLDEMKRR GIKPDLISYN TLISGYSKRG DMKDAFGVRD EMMTTGFDPT ILTYDALIQG LCKNREGEHA
401: EELLKEMVSK GIPPDDSTYL SIIEAMEAVD DLEENDDK

Best Arabidopsis Sequence Match ( AT2G15630.1 )
(BLAST)

001: MRRFTVPCIL RHRISILSGA GYSPAAARLS SLAQTSTPES VLPPITSEIL LESIRSSQWH IVEHVADKLT PSLVSTTLLS LVKTPNLAFN FVNHIDLYRL
101: DFQTQCLAIA VISKLSSPKP VTQLLKEVVT SRKNSIRNLF DELVLAHDRL ETKSTILFDL LVRCCCQLRM VDEAIECFYL MKEKGFYPKT ETCNHILTLL
201: SRLNRIENAW VFYADMYRME IKSNVYTFNI MINVLCKEGK LKKAKGFLGI MEVFGIKPTI VTYNTLVQGF SLRGRIEGAR LIISEMKSKG FQPDMQTYNP
301: ILSWMCNEGR ASEVLREMKE IGLVPDSVSY NILIRGCSNN GDLEMAFAYR DEMVKQGMVP TFYTYNTLIH GLFMENKIEA AEILIREIRE KGIVLDSVTY
401: NILINGYCQH GDAKKAFALH DEMMTDGIQP TQFTYTSLIY VLCRKNKTRE ADELFEKVVG KGMKPDLVMM NTLMDGHCAI GNMDRAFSLL KEMDMMSINP
501: DDVTYNCLMR GLCGEGKFEE ARELMGEMKR RGIKPDHISY NTLISGYSKK GDTKHAFMVR DEMLSLGFNP TLLTYNALLK GLSKNQEGEL AEELLREMKS
601: EGIVPNDSSF CSVIEAMSNL DAKKSDS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.