CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58559	Soybean	plastid	70.04	89.76
VIT_01s0010g01780.t01	Wine grape	cytosol	48.6	65.65
CDY17611	Canola	cytosol	45.14	57.17
AT2G02150.1	Thale cress	mitochondrion, plastid	56.99	56.24
Bra024831.1-P	Field mustard	mitochondrion	53.4	54.78
CDY03072	Canola	mitochondrion	53.13	54.21
GSMUA_Achr1P06500_001	Banana	cytosol	35.82	52.75
Solyc02g021280.1.1	Tomato	endoplasmic reticulum	51.4	50.86
PGSC0003DMT400043863	Potato	endoplasmic reticulum, golgi	51.4	50.72
PGSC0003DMT400043860	Potato	endoplasmic reticulum, golgi	51.4	50.72
TraesCS7A01G360200.1	Wheat	mitochondrion	39.01	41.86
Os06t0565000-00	Rice	mitochondrion	37.68	40.78
TraesCS7D01G362900.1	Wheat	mitochondrion	33.56	40.71
TraesCS7B01G267600.1	Wheat	mitochondrion	33.82	40.32
Zm00001d023302_P001	Maize	mitochondrion	37.55	40.29
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	36.62	39.8
KXG22891	Sorghum	mitochondrion	25.3	32.48
KRG99196	Soybean	cytosol	22.37	31.82
KRH45820	Soybean	cytosol, mitochondrion, plastid	29.16	29.51
KRH24548	Soybean	mitochondrion	23.57	28.41
KRH29211	Soybean	cytosol	21.97	28.3
KRH33556	Soybean	cytosol	7.86	28.23
KRH18049	Soybean	plastid	24.63	26.93
KRH29553	Soybean	mitochondrion	15.58	26.71
KRH16451	Soybean	plastid	24.37	26.64
KRH20741	Soybean	cytosol	20.37	26.06
KRH14574	Soybean	plastid	22.1	25.94
KRH72966	Soybean	mitochondrion	21.17	25.85
KRH50360	Soybean	cytosol, extracellular, plastid	19.04	25.72
KRG89236	Soybean	plastid	26.63	25.71
KRH13392	Soybean	cytosol	19.84	25.38
KRH17313	Soybean	mitochondrion	16.11	25.37
KRH51875	Soybean	cytosol	19.17	25.35
KRH02112	Soybean	extracellular, mitochondrion	18.11	25.09
KRH54581	Soybean	mitochondrion	17.58	24.81
KRH34922	Soybean	cytosol	15.05	24.62
KRH44246	Soybean	cytosol	16.25	24.45
KRG90304	Soybean	cytosol	18.24	24.42
KRH51037	Soybean	endoplasmic reticulum, extracellular, plastid	14.91	24.14
KRH56553	Soybean	plastid	19.57	23.48
KRH40170	Soybean	mitochondrion	21.57	23.38
KRH49758	Soybean	plastid	20.64	22.02
KRG93154	Soybean	plastid	22.1	17.38

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100786756	MapMan:35.1	EMBL:ACUP02004804	EnsemblPlantsGene:GLYMA_08G090700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	UniProt:K7L5N5	ProteinID:KRH42454.1	ProteinID:KRH42455.1	ProteinID:KRH42456.1
ProteinID:KRH42457.1	EnsemblPlants:KRH42458	ProteinID:KRH42458	ProteinID:KRH42458.1	PFAM:PF01535	PFAM:PF12854
PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF329	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00029610F8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:6822386..6826320

Molecular Weight (calculated)

84364.1 Da

IEP (calculated)

6.439

GRAVY (calculated)

0.069

Length

751 amino acids

Sequence
(BLAST)

001: MLLFARNIGG RASLRVSSFH SSPLQNPFPL FLTPSSLSSQ NSIFARPVIW FTSFLCVIRY PFVSKPSFDD IASESMRSFL QQDGPHLSDS ALAPIWVSKA
101: LVKLKGDPKS ALKFFKEAGA RAGFRHAAES YCVLAHILFC GMFYLDARSV IKEWILLGRE FPGCDFFDML WSTRNVCRPG FGVFDTLFNV LVDLGMLEEA
201: RQCFWKMNKF RVLPKVRSCN ELLHRLSKSS KGGLALSFFK DMVVAGLSPS VFTYNMVIGC LAREGDLEAA RSLFEEMKAK GLRPDIVTYN SLIDGYGKVG
301: MLTGAVSVFE EMKDAGCEPD VITYNSLINC FCKFERIPQA FEYLHGMKQR GLQPNVVTYS TLIDAFCKAG MLLEANKFFV DMIRVGLQPN EFTYTSLIDA
401: NCKIGDLNEA FKLESEMQQA GVNLNIVTYT ALLDGLCEDG RMREAEELFG ALLKAGWTLN QQIYTSLFHG YIKAKMMEKA MDILEEMNKK NLKPDLLLYG
501: TKIWGLCRQN EIEDSMAVIR EMMDCGLTAN SYIYTTLIDA YFKVGKTTEA VNLLQEMQDL GIKITVVTYG VLIDGLCKIG LVQQAVRYFD HMTRNGLQPN
601: IMIYTALIDG LCKNDCLEEA KNLFNEMLDK GISPDKLVYT SLIDGNMKHG NPGEALSLRN RMVEIGMELD LCAYTSLIWG FSRYGQVQLA KSLLDEMLRK
701: GIIPDQVLCI CLLRKYYELG DINEALALHD DMARRGLISG TIDITVPSVH T

Best Arabidopsis Sequence Match ( AT2G02150.2 )
(BLAST)

001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.