Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- nucleus 1
- plasma membrane 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17611 | Canola | cytosol | 66.36 | 85.16 |
| CDY03072 | Canola | mitochondrion | 80.68 | 83.42 |
| Bra024831.1-P | Field mustard | mitochondrion | 79.37 | 82.51 |
| VIT_01s0010g01780.t01 | Wine grape | cytosol | 44.68 | 61.15 |
| KRH42458 | Soybean | plastid | 56.24 | 56.99 |
| KRH58559 | Soybean | plastid | 42.31 | 54.95 |
| GSMUA_Achr1P06500_001 | Banana | cytosol | 34.17 | 50.98 |
| Solyc02g021280.1.1 | Tomato | endoplasmic reticulum | 50.2 | 50.33 |
| PGSC0003DMT400043863 | Potato | endoplasmic reticulum, golgi | 50.2 | 50.2 |
| PGSC0003DMT400043860 | Potato | endoplasmic reticulum, golgi | 50.2 | 50.2 |
| TraesCS7A01G360200.1 | Wheat | mitochondrion | 38.11 | 41.43 |
| HORVU7Hr1G087760.14 | Barley | cytosol, mitochondrion | 36.53 | 40.23 |
| TraesCS7D01G362900.1 | Wheat | mitochondrion | 32.46 | 39.9 |
| Os06t0565000-00 | Rice | mitochondrion | 35.74 | 39.19 |
| TraesCS7B01G267600.1 | Wheat | mitochondrion | 31.93 | 38.57 |
| Zm00001d023302_P001 | Maize | mitochondrion | 35.48 | 38.57 |
| KXG22891 | Sorghum | mitochondrion | 25.36 | 32.99 |
| AT1G05670.3 | Thale cress | mitochondrion | 27.73 | 28.48 |
| AT2G15630.1 | Thale cress | mitochondrion | 22.73 | 27.59 |
| AT2G01740.1 | Thale cress | cytosol | 19.71 | 26.83 |
| AT1G09680.1 | Thale cress | mitochondrion | 20.63 | 25.86 |
| AT4G26680.1 | Thale cress | mitochondrion | 17.35 | 25.34 |
| AT1G09820.1 | Thale cress | mitochondrion, plastid | 19.97 | 25.08 |
| AT2G32630.1 | Thale cress | mitochondrion, plastid | 20.37 | 24.84 |
| AT5G39710.1 | Thale cress | mitochondrion | 24.18 | 24.63 |
| AT1G22960.1 | Thale cress | mitochondrion | 22.86 | 24.23 |
| AT4G11690.1 | Thale cress | endoplasmic reticulum | 18.0 | 24.2 |
| AT4G19890.1 | Thale cress | plastid | 22.21 | 24.11 |
| AT1G11710.1 | Thale cress | mitochondrion | 20.63 | 23.9 |
| AT5G01110.2 | Thale cress | cytosol, plastid | 23.65 | 23.78 |
| AT5G38730.1 | Thale cress | cytosol | 18.27 | 23.32 |
| AT5G61400.1 | Thale cress | mitochondrion | 19.84 | 23.09 |
| AT2G16880.1 | Thale cress | cytosol | 21.81 | 22.34 |
| AT5G40400.2 | Thale cress | cytosol | 19.84 | 22.17 |
| AT2G19280.1 | Thale cress | mitochondrion | 19.84 | 21.79 |
| AT2G28050.1 | Thale cress | cytosol, plastid | 12.48 | 20.56 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:814746 | ProteinID:AAC97219.1 | ProteinID:AEC05553.1 | ProteinID:ANM62913.1 |
| ArrayExpress:AT2G02150 | EnsemblPlantsGene:AT2G02150 | RefSeq:AT2G02150 | TAIR:AT2G02150 | RefSeq:AT2G02150-TAIR-G | EnsemblPlants:AT2G02150.1 |
| TAIR:AT2G02150.1 | Unigene:At.75294 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_001318179.1 |
| RefSeq:NP_178323.3 | UniProt:P0C894 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PO:PO:0000293 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF329 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI000186C956 | SEG:seg | : | : | : |
Description
Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
Coordinates
chr2:-:549827..552856
Molecular Weight (calculated)
86089.8 Da
IEP (calculated)
5.602
GRAVY (calculated)
0.024
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.