Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30265 | Canola | mitochondrion | 86.35 | 88.36 |
| Bra025651.1-P | Field mustard | mitochondrion | 86.88 | 87.11 |
| CDX74435 | Canola | mitochondrion | 86.75 | 86.98 |
| VIT_03s0063g00930.t01 | Wine grape | cytosol, plastid | 65.73 | 64.44 |
| KRG89236 | Soybean | plastid | 59.97 | 57.58 |
| Solyc01g108410.1.1 | Tomato | mitochondrion | 58.37 | 56.84 |
| PGSC0003DMT400066369 | Potato | mitochondrion | 58.1 | 56.58 |
| OQU75844 | Sorghum | cytosol | 36.41 | 49.36 |
| KRH49758 | Soybean | plastid | 45.78 | 48.58 |
| GSMUA_Achr3P04340_001 | Banana | cytosol | 42.3 | 48.02 |
| Zm00001d010121_P001 | Maize | plastid | 40.96 | 44.28 |
| Os06t0152500-00 | Rice | plastid | 40.96 | 44.09 |
| Zm00001d045319_P001 | Maize | plastid | 40.7 | 43.99 |
| TraesCS7A01G109000.1 | Wheat | plastid | 40.43 | 43.45 |
| TraesCS7D01G103900.1 | Wheat | plastid | 40.16 | 43.17 |
| TraesCS7B01G006900.1 | Wheat | plastid | 40.03 | 43.02 |
| HORVU7Hr1G023200.23 | Barley | cytosol | 39.49 | 42.51 |
| AT4G11690.1 | Thale cress | endoplasmic reticulum | 22.22 | 29.33 |
| AT1G05670.3 | Thale cress | mitochondrion | 27.84 | 28.07 |
| AT2G01740.1 | Thale cress | cytosol | 20.35 | 27.19 |
| AT1G09820.1 | Thale cress | mitochondrion, plastid | 21.42 | 26.4 |
| AT2G15630.1 | Thale cress | mitochondrion | 21.82 | 26.0 |
| AT4G26680.1 | Thale cress | mitochondrion | 18.07 | 25.91 |
| AT4G19890.1 | Thale cress | plastid | 24.1 | 25.68 |
| AT2G32630.1 | Thale cress | mitochondrion, plastid | 21.42 | 25.64 |
| AT1G09680.1 | Thale cress | mitochondrion | 20.75 | 25.54 |
| AT5G38730.1 | Thale cress | cytosol | 19.95 | 25.0 |
| AT1G22960.1 | Thale cress | mitochondrion | 23.43 | 24.37 |
| AT2G02150.1 | Thale cress | mitochondrion, plastid | 24.63 | 24.18 |
| AT5G01110.2 | Thale cress | cytosol, plastid | 24.5 | 24.17 |
| AT5G61400.1 | Thale cress | mitochondrion | 21.15 | 24.16 |
| AT2G16880.1 | Thale cress | cytosol | 23.29 | 23.42 |
| AT1G11710.1 | Thale cress | mitochondrion | 20.48 | 23.29 |
| AT2G19280.1 | Thale cress | mitochondrion | 20.21 | 21.79 |
| AT5G40400.2 | Thale cress | cytosol | 18.88 | 20.7 |
| AT2G28050.1 | Thale cress | cytosol, plastid | 11.91 | 19.26 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:833967 | ProteinID:AED94466.1 | ArrayExpress:AT5G39710 | EnsemblPlantsGene:AT5G39710 |
| RefSeq:AT5G39710 | TAIR:AT5G39710 | RefSeq:AT5G39710-TAIR-G | EnsemblPlants:AT5G39710.1 | TAIR:AT5G39710.1 | ProteinID:BAB11377.1 |
| Symbol:EMB2745 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_198787.1 |
| PFAM:PF12854 | PFAM:PF13041 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF280 | InterPro:Pentatricopeptide_repeat | UniProt:Q9FIX3 | SUPFAM:SSF81901 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A3105 | : | : | : |
Description
EMB2745Pentatricopeptide repeat-containing protein At5g39710 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIX3]
Coordinates
chr5:+:15895682..15898219
Molecular Weight (calculated)
84278.4 Da
IEP (calculated)
7.381
GRAVY (calculated)
-0.077
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.